Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_029102.1 Length=36051 Score E Sequences producing significant alignments: (Bits) Value seq28963 98.7 2e-16 >seq28963 Length=574 Score = 98.7 bits (108), Expect = 2e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 6622 TAAAGGAACCCGTAAATGAATGTCTTGGCGTTGTCGCGCGTTGGGAGTTCCGCAGCGTTC 6681 || ||||| |||| ||||| ||||||||||||||||| ||||| ||| | || || Sbjct 2 TAGAGGAAGGCGTAGATGAAGGTCTTGGCGTTGTCGCGGGTTGGCAGTCCTGCCGCCGAT 61 Query 6682 TGGTTCTTGGTGTGAATGTCACCGTTGAGAATCTCATTCGCATACTCTCCGTTGTCGAAG 6741 ||||| || ||| ||||| || | ||| || | || || ||||| ||| |||| Sbjct 62 TGGTTGACGGAGTGGATGTCGCCTTCGAGGATGACCTTGGCGTACTCGCCGCCGTCGTGC 121 Query 6742 CGAGCCATGAAGTGTGCCAGACAGCGCAACTCTAAGCCACTGGCGTC 6788 ||||||||||| ||||| ||||||| ||| || || |||||| Sbjct 122 TTTGCCATGAAGTGCGCCAGGCAGCGCAGCTCCAATCCCGAGGCGTC 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112398004948906