Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq980070 82.4 7e-11 >seq980070 Length=1613 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || ||||||| || ||||| ||||| ||| || ||||| ||||| || | Sbjct 428 TGGGCCATCATGTGGGTCAGCAGGGCGTAGGAAGCGATATTGAAGGGCACGCCGAGGAAG 487 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| | || || ||||||||||||||||||| || | || |||||||| ||| Sbjct 488 ATGTCGGCGCTGCGCTGGTAGAGCTGGCAGGACAGCTTGCCGTCGGCCACGTAGAACTGG 547 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769 ||| || |||||| || || ||| |||| Sbjct 548 AAGAAGGCGTGGCAGGGCGGCAGCTTCATC 577 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 |||| ||| || || |||||| || ||| ||| |||||||| || | || ||||||| Sbjct 577 GATGAAGCTGCCGCCCTGCCACGCCTTCTTCCAGTTCTACGTGGCCGACGGCAAGCTGTC 518 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || | ||||| | || ||||| ||||| || ||| Sbjct 517 CTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCCTTCAATATCGCTTC 458 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| ||||| || ||||||| || || Sbjct 457 CTACGCCCTGCTGACCCACATGATGGCCCA 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 436619338884720