Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq138594 109 5e-19 seq102963 105 6e-18 seq948143 98.7 8e-16 seq19311 98.7 8e-16 seq1989185 95.1 1e-14 seq895220 95.1 1e-14 seq878454 93.3 4e-14 seq1978033 91.5 1e-13 seq218242 91.5 1e-13 seq232690 89.7 4e-13 seq260872 87.8 2e-12 seq139869 86.0 5e-12 seq694938 84.2 2e-11 seq11307 84.2 2e-11 >seq138594 Length=2879 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || ||| ||| || || || || || ||||| || || || |||| || Sbjct 42 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 101 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || || ||||||||||| | || | || ||| |||||| Sbjct 102 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 161 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| ||| | | | || || ||||||||| |||| |||||| | | Sbjct 162 GATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCCAGCGTGATGGTCT 220 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | |||||||| || || || ||||| |||||||| Sbjct 221 TGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 254 >seq102963 Length=6263 Score = 105 bits (116), Expect = 6e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| | | ||| | ||||| || || ||| ||| || || || || || ||||| Sbjct 3515 GCCTCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 3456 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || || || |||| || ||||| || || || || || || ||||||||||| | || Sbjct 3455 GAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 3396 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCA 39235 | || ||| |||||| ||| || |||| ||| | | | || || ||||||| Sbjct 3395 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGGACTCCA 3337 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | |||| |||||| | || |||||||| || || || ||||| |||||||| Sbjct 3336 CCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3285 >seq948143 Length=1505 Score = 98.7 bits (108), Expect = 8e-16 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || ||||| || || | Sbjct 321 GCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCC 262 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| || || || || ||||||||||| | ||| | || ||| || Sbjct 261 ATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 202 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || |||| ||| | | | || ||| ||||||||| || | |||| Sbjct 201 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGACGACTCCACCTCAAGAGTGA 143 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | || || || || || || || ||||| |||||| Sbjct 142 TAGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATC 105 >seq19311 Length=2760 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || ||||| ||||| || || || | || |||||||| ||||| ||||| Sbjct 2755 CTCCTTCTGGATGTTATAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 2696 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | || | || ||| |||||| ||| || |||| ||| Sbjct 2695 GATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 2637 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || ||||| || || | ||||| | || || ||||| || || | Sbjct 2636 TGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 2577 Query 39272 CAAAGATTTGCATCTTTA 39289 ||||||| ||||||| || Sbjct 2576 CAAAGATCTGCATCTGTA 2559 >seq1989185 Length=2918 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| || || || || || || |||||| Sbjct 2527 CCACCTCGGAGGCGGAGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCA 2586 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| ||||| ||||| ||||||||||||||||| | ||| Sbjct 2587 AGGGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGGGGGA 2646 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTC 39233 | || ||| |||||| ||| || |||| ||| | | | || || ||| ||| Sbjct 2647 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCTGAGCT---CTC 2702 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||| | || || || || || || |||||||| ||||| Sbjct 2703 AACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 2753 >seq895220 Length=1325 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || ||||| || | |||| |||||||| Sbjct 1259 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGC 1200 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 1199 TTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1140 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || || |||||| || || | ||||| | || || || Sbjct 1139 GCCTTGA-CGTTGTCGATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCTGT 1081 Query 39261 CAGCGTTTTAACAAAGATTTGCATCT 39286 || ||| || |||||||| ||||||| Sbjct 1080 CAACGTCTTCACAAAGATCTGCATCT 1055 >seq878454 Length=5435 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || ||||| || || || || | Sbjct 1049 GCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCC 990 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| ||||| ||||| ||||||||||| | ||| | || ||| || Sbjct 989 ATCCTCAAGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTT 930 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| || | | | | || || |||||||| |||| ||||| Sbjct 929 GTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGAT 870 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || || || || ||||| Sbjct 869 GGTCTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 834 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || || || || || | Sbjct 593 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCC 534 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| || || || || ||||||||||| | || | || ||| || Sbjct 533 ATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTT 474 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| |||| ||| | | | || || |||||||| || | |||| Sbjct 473 GTCCTGGATCTTCGCCTTGA-CGTTGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGA 415 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTA 39289 | | || || || || || || || ||||| ||||||| || Sbjct 414 TGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTGTA 373 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAAT 39112 || |||||| | |||| | | ||||| || || ||| ||| || || || ||||| | Sbjct 836 CATGCCTCCACG-AAGCCTGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGT 778 Query 39113 CGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGG 39172 | || || || || | || || ||||| ||||| ||||| || || ||||||||||| | Sbjct 777 CAGCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCG 718 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGAC 39231 ||| | || || || ||| ||| || || | ||| | | | || || ||| Sbjct 717 GGGGGATGCCTTCCTTATCCTGGATCTT-TGCCTTCACGTTGTCGATGGTGTCAGAGGAC 659 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || | ||||| | || |||||||| || || || ||||| ||||| Sbjct 658 TCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 606 >seq1978033 Length=13150 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| | | ||| | |||||| || || || ||| || || || || ||||| || Sbjct 5510 GCCTCCACGAAGGCGGAGCACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCTGC 5451 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 ||| || || | || |||||||| || || ||||| || || ||||||||||| | ||| Sbjct 5450 AAGAGTGCGACCATCCTCAAGCTGCTTACCTGCAAAGATCAGGCGCTGCTGGTCCGGGGG 5391 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||| |||||| ||| || || | | | | || || || ||||| Sbjct 5390 GATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAAGATTCCAC 5331 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | || || || || || || || ||||||||||| Sbjct 5330 CTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATTTGCAT 5283 >seq218242 Length=2478 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| | | ||| | || | || || ||| ||| || || || || || || Sbjct 1244 CATGCCTCCACGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1185 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||||| || | | || || ||||| ||||| ||||| || |||||||||||||| | Sbjct 1184 AGCAAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGG 1125 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || ||| |||||| ||| || |||| | | | || || |||||| Sbjct 1124 AGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCAGACGACTC 1065 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||| || | ||||| | ||||| |||| || || |||||||| ||||||| Sbjct 1064 CACCTCAAGGGTGATGGTCTTTCCAGTCAATGTCTTCACAAAGATCTGCATCT 1012 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||||| | ||| | || | || || ||| ||| || || || || || || Sbjct 1472 CATGCCTCCTCGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1413 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||||| || | | || |||||||| ||||| ||||| || || ||||||||||| | Sbjct 1412 AGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGG 1353 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || || |||||| ||| || | | | ||| | | | || ||| || | Sbjct 1352 GGGAATGCCTTCCTTGTCCTGGATCTT-GGCCTTAACGTTGTCGATGGTGTCGGATGATT 1294 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| |||| ||||| | || || |||| ||| || || ||||| ||||| Sbjct 1293 CCACCTCCAGGGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 1242 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || ||||| || || | || || ||||| ||||| ||||| Sbjct 1661 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCAAA 1602 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| || |||| ||| Sbjct 1601 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1543 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || ||| || ||||| || | ||||| | || || || || || || | Sbjct 1542 TGTCGATGGTGTCGGATGATTCCACCTCAAGTGTGATGGTCTTGCCAGTGAGGGTCTTGA 1483 Query 39272 CAAAGATTTGCAT 39284 | ||||| ||||| Sbjct 1482 CGAAGATCTGCAT 1470 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || |||||||| || || | Sbjct 1913 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCC 1854 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || | ||| ||||| ||||| || || ||||||||||| | ||| | | ||| || Sbjct 1853 ATCCTCCAACTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCAGGGGGGATCCCCTCCTT 1794 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| |||| | | | || || ||| || |||| ||||| Sbjct 1793 GTCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCCAAAGTGAT 1734 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || |||||||| ||||| Sbjct 1733 GGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCAT 1698 >seq232690 Length=472 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || |||||| ||| || || | || || ||||| || || || | Sbjct 39 GCGGAGCACGAGGTGCAGCGTGA-CTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGGCC 97 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || || || || || || ||||||||||| | || | | ||| || Sbjct 98 GTCCTCCAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTT 157 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || |||| ||| | | | || ||||| |||||| |||| |||| Sbjct 158 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGA 216 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || |||||||| || || || ||||| |||||||| Sbjct 217 TGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATCTT 256 >seq260872 Length=904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || ||||| ||| || || | || || ||||| || || || | Sbjct 892 GCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGGCC 833 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || || || || || || ||||||||||| | || | | ||| || Sbjct 832 GTCCTCCAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGCGGGATCCCCTCCTT 773 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || |||| ||| | | | || ||||| |||||| |||| |||| Sbjct 772 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGA 714 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || |||||||| || || || ||||| |||||||| Sbjct 713 TCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATCTT 674 >seq139869 Length=4701 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| || || || || || ||||| ||||| || || | || || Sbjct 754 CACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 695 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| || || || || ||||||||||| | ||| | || ||| |||||| Sbjct 694 AAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 635 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | || || ||||| || |||| ||||| | || Sbjct 634 GATCTTGGCCTTGACATTATCAATGGTGTCCGAGGACTCAACCTCCAAGGTGATGGTCTT 575 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| ||||| Sbjct 574 GCCGGTGAGTGTCTTCACGAAGATCTGCAT 545 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || || || || || || | || || Sbjct 526 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGCCCATCCTC 467 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| || || || |||||||||||||| | || | || ||| |||||| Sbjct 466 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 407 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | || || ||||| || || | ||||| | || Sbjct 406 GATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATGGTCTT 347 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTA 39289 || || || || || || ||||| ||||||| || Sbjct 346 CCCGGTGAGGGTCTTCACGAAGATCTGCATCTGTA 312 >seq694938 Length=221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || || || | ||| | ||||| || || ||| ||| || || || || || || || Sbjct 40 CCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 99 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || ||||| |||| |||||||| || || ||||| || || ||||||||||| | ||| Sbjct 100 AGGGTTCGGCCGTCCTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 159 Query 39178 ACGCTCTCTTTGTCCATGATTTTC 39201 | || ||| |||||| ||| ||| Sbjct 160 ATGCCCTCCTTGTCCTGGATCTTC 183 >seq11307 Length=2396 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || | |||| || ||||| ||||| || || Sbjct 57 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTCCCGTCCTCGAGCTGCTTGCCAGCGAA 116 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | || | || ||| || ||| ||| || |||| ||| Sbjct 117 GATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGA-CGT 175 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || |||||||| || | ||||| | || |||||||| || || | Sbjct 176 TGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGTGTCTTCA 235 Query 39272 CAAAGATTTGCATCT 39286 ||||||| ||||||| Sbjct 236 CAAAGATCTGCATCT 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418667607487613