Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq71034 84.2 1e-11 >seq71034 Length=3563 Score = 84.2 bits (92), Expect = 1e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 47475 TGCCGTTCATTCACCCTCACGTCGCCCTGATGCCGGATGCACACGGCGGCAAAGGATCTG 47534 |||| ||||| || ||| | || |||||| || | |||| ||||| ||||| Sbjct 1554 TGCCCTTCATCTACAAGCACATGGCGGCGATGCCCGACGTCCACGTGGGCAAGGGATCGA 1613 Query 47535 CCGTTGGCACGGTGATTCCCACCGTGGATGCCGTGATCCCGGCCGCGGTCGGCGTGGACA 47594 || | |||| ||||| || || ||| || | || |||||||||||||| || |||| Sbjct 1614 CCATCGGCAGCGTGATCCCGACGCTGGGCGCGATCATTCCGGCCGCGGTCGGGGTCGACA 1673 Query 47595 TCGGCTGCGGCATGAT 47610 |||||||||||||||| Sbjct 1674 TCGGCTGCGGCATGAT 1689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 290375349259100