Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_031018.1 Length=39274 Score E Sequences producing significant alignments: (Bits) Value seq28003 80.6 7e-11 >seq28003 Length=244 Score = 80.6 bits (88), Expect = 7e-11 Identities = 101/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 37308 ATGAGGACCTGAAGGAACGTGAGCTGTCCTACGGTAAGGCT--GGCTTCGCTCTACAGTT 37365 |||||||| ||| ||| || ||| ||||||||| | ||| |||||| || ||||| Sbjct 244 ATGAGGACTTGATGGAGCGCGAGGCGTCCTACGG--ACGCTCCGGCTTCATGCTCCAGTT 187 Query 37366 CATGCTCAACCCGAACCTAGGGGATGCCGAGAAGTACCCTCTGAAGCTGCGTGACCTTAT 37425 ||||||| | || || || |||||||||||||| || |||||| ||||| || Sbjct 186 CATGCTCGATGCGTCGCTGTCCGACGCCGAGAAGTACCCGCTCAAGCTGTCCGACCTGAT 127 Query 37426 CGTAGCGGACTTGGACC 37442 ||| |||| |||||| Sbjct 126 CGTGATGGACGTGGACC 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122457116101832