Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq957357 111 2e-19 >seq957357 Length=1670 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 ||||| ||||||| ||| | ||||||| ||| | || | ||||| |||| || || Sbjct 1515 CCTCCTTGATCTACATAACGAGCAGTGTCATTGAAGACACGTAACATAGGAACTATCCCA 1456 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||||||||| |||||| || ||| |||||||| || || ||| Sbjct 1455 TTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAGTAGCACGAATGTTGTGAACAGAG 1396 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || ||| || | |||||| || | || |||||||| Sbjct 1395 ACACCAATTCCTCCAGCAGATTTGCTTATGACAGCACATTCCTTGAGAGTATCATAGATT 1336 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||||| || |||||||| ||||| | ||| |||||||| Sbjct 1335 CCCTCGATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 1295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694416811216320