Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_031066.1 Length=39434 Score E Sequences producing significant alignments: (Bits) Value seq28963 95.1 3e-15 >seq28963 Length=574 Score = 95.1 bits (104), Expect = 3e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 16043 GACGCCAGTGGCTTAGAGTTGCGCTGTCTGGCACACTTCATGGCTCGTTTCGATAACGGA 16102 |||||| || || ||| ||||||| ||||| ||||||||||| ||| ||| Sbjct 168 GACGCCTCGGGATTGGAGCTGCGCTGCCTGGCGCACTTCATGGCAAAGCACGACGGCGGC 109 Query 16103 GAGTATGCGAATGAGATTCTCAACGGTGACATTCACACCAAGAACCAGAACGCTGCGGAA 16162 ||||| || || | || ||| | || ||||| ||| || ||||| || || | | Sbjct 108 GAGTACGCCAAGGTCATCCTCGAAGGCGACATCCACTCCGTCAACCAATCGGCGGCAGGA 49 Query 16163 CTCCCAACGCGAGACAACGCCAAGACCTTCATTTACGGGTTCCTTTA 16209 || ||||| || |||||||||||||||||||| |||| ||||| || Sbjct 48 CTGCCAACCCGCGACAACGCCAAGACCTTCATCTACGCCTTCCTCTA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122956482463752