Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq7353 86.0 4e-12 >seq7353 Length=217 Score = 86.0 bits (94), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTA 44766 |||| | || |||||||||||| | | ||| | ||||| || |||||||| | | Sbjct 194 CGCCCAGCAGTTGCATGGTGCCTTGCATGTCGACCACGATTTCAGTGGTGTAACGCTTGA 135 Query 44767 CACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAAC 44826 ||| | | || ||||| ||||||| || || ||||||||||||||||| |||| Sbjct 134 TGCCGTCTTTTTC---CCACTCGCGGGTTTGCAGCTTGCCTTCGATGTAGACCTGCGAAC 78 Query 44827 CTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCC 44886 |||| || | ||||||| || || || || | || ||||||| || |||| Sbjct 77 CTTTGCGCAGGTACTCACCAGCGATCTCTGCCACCTTGCCGAACATCGACACACGGTGCC 18 Query 44887 ATTCTGTTTGCTC 44899 |||| |||| ||| Sbjct 17 ATTCGGTTTTCTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322519370198566