Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq900588 697 0.0 seq94777 589 2e-163 seq174834 262 4e-65 seq747441 123 3e-23 seq542521 107 2e-18 seq2075000 105 7e-18 seq124049 96.9 4e-15 seq780762 95.1 1e-14 seq188012 91.5 2e-13 seq1480420 86.0 7e-12 seq272447 86.0 7e-12 seq219505 86.0 7e-12 seq56660 86.0 7e-12 seq1383633 84.2 2e-11 seq1984290 82.4 8e-11 >seq900588 Length=4557 Score = 697 bits (772), Expect = 0.0 Identities = 754/994 (76%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 ||||| |||||| ||||| || || |||||| | || |||| |||||||| || || Sbjct 3000 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3059 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| ||| | | | || ||| | ||| || || ||||||||||||| ||| | Sbjct 3060 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCTGCCC 3117 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || ||||| || || ||||||| | | |||||||||| Sbjct 3118 CTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 3177 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || |||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| | Sbjct 3178 ATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 3237 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| ||| | | || || ||| | ||||| |||||||||| | || ||| Sbjct 3238 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTG 3297 Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285 | | |||||| | |||| | | ||| ||||||||||||||||||||| || || Sbjct 3298 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 3357 Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345 |||| |||||||||||||||||| || ||||| || |||||||| || || || | || Sbjct 3358 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 3417 Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405 | || ||| || | || ||| | |||||||| || ||||||| |||||| | || | Sbjct 3418 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 3477 Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465 ||||||| || ||||||| ||| | || |||||||| |||||||||||||| ||||| | Sbjct 3478 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATC 3537 Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525 | ||||| ||| | || ||||| ||||| || |||||||| || |||||||| ||||| | Sbjct 3538 CATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 3597 Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585 |||| |||| || ||| || | | || || || |||||||| || || | | Sbjct 3598 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 3657 Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645 ||||||| |||||||| || ||||| || || || || || || ||||| ||||| |||| Sbjct 3658 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 3717 Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705 | || | || |||||||| ||| ||||||||||| ||||| | ||||||||| | | Sbjct 3718 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 3777 Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765 | || |||||||| || || |||||||| |||||| | || |||| || ||||| |||| Sbjct 3778 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 3837 Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825 |||| || |||||||| |||||||| || | | ||| |||| ||||| || | || | Sbjct 3838 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 3897 Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885 | ||||| || | ||||||||||| || || |||||||| |||||||| ||||||| Sbjct 3898 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 3957 Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 |||||||||||||||| ||| | ||||||| ||| Sbjct 3958 CTCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 3991 >seq94777 Length=2712 Score = 589 bits (652), Expect = 2e-163 Identities = 738/1007 (73%), Gaps = 4/1007 (0%) Strand=Plus/Plus Query 165165 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 165224 || |||||| | ||| ||||||||||||||||| || |||||||| || | || ||| Sbjct 1078 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 1137 Query 165225 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 165284 || ||||||| | ||| | ||||||||| |||| ||||| ||||| || || |||| Sbjct 1138 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 1197 Query 165285 TATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTA-CTGCGGCAGT 165343 ||||| || ||| | || ||||||||| | || ||| || ||||||| | || ||||| Sbjct 1198 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 1256 Query 165344 TTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCA 165403 |||||| || || | | | | || ||| | |||| |||||||| || || | || Sbjct 1257 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACA 1316 Query 165404 AGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGG 165463 ||| || || | || ||||| ||| | || || || ||||||||||| || |||||||| Sbjct 1317 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGG 1376 Query 165464 AGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTA 165522 || |||||||| |||||||||||| | ||||| |||||||| || || || || | Sbjct 1377 GGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT- 1435 Query 165523 TTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTC 165582 | || ||||| ||||| || | ||||||||||| |||||||| || ||| || || | Sbjct 1436 TGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTCC 1495 Query 165583 TTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAA 165642 |||| ||||| ||||| ||||| |||||||| || ||| || || || ||||| | Sbjct 1496 TTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGA 1555 Query 165643 TCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACA 165702 | || |||||| | || ||| ||||||| || ||||| |||||| |||| || ||||| | Sbjct 1556 TATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATA 1615 Query 165703 TGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAG 165762 ||||||| || || || | ||||||| || |||| | || |||||||| | || | Sbjct 1616 TGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCG 1675 Query 165763 TAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTA 165822 |||| || ||| | | ||| || ||||| ||||| || ||| || ||| | | Sbjct 1676 TAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAA 1735 Query 165823 CTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTG 165882 |||| | || ||||||||||| ||||||||||||||||| || ||||| || || |||| Sbjct 1736 CTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTG 1795 Query 165883 GTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGG 165942 || ||||||| |||||| |||||| | || ||||||||||| ||||| || |||| | Sbjct 1796 GTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCG 1855 Query 165943 GACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATT 166002 | | |||| ||| ||||||| | |||| | || || || | ||||| ||||| | Sbjct 1856 GTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACT 1915 Query 166003 TTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAA 166062 |||| || ||||| || | || || || ||||| || || || || ||||| || |||| Sbjct 1916 TTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAA 1975 Query 166063 ACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGA 166122 | || || | || || || | ||||| ||| |||| || || || |||||||| | Sbjct 1976 ATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAA 2035 Query 166123 ACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 | || | |||||||| || || | ||| | || ||||| |||||| Sbjct 2036 ATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 2082 >seq174834 Length=1002 Score = 262 bits (290), Expect = 4e-65 Identities = 421/595 (71%), Gaps = 11/595 (2%) Strand=Plus/Minus Query 165165 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 165224 || |||||| | ||| | ||||||| ||||||| || |||| ||| || | || ||| Sbjct 623 GATGACTGGTTACGAAGGGGCCGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCTTT 564 Query 165225 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTT--ACTGGGACTACTTTCGTCACGAGTT 165282 || ||||||| | || || |||||||| || || || || |||| || || || Sbjct 563 CCTTATGCTTATTTCTCT-TTAGGGGTTGGTTTTTACAGGAACAACTTATGTAACTTCTT 505 Query 165283 GGTATACTCACGGACTTGCGAGTTCCTATCTT-GAGGGTGCAAACTTTCTTA-CTGCGGC 165340 ||||||||| ||||| || ||||||||| | |||| || || ||||||| | ||| | Sbjct 504 TGTATACTCATGGACTGGCAAGTTCCTATTTGCGAGGTTGTAA--TTTCTTAACAGCGAC 447 Query 165341 AGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTC 165400 | ||||||| || | | | | || ||| | |||| |||||||| || || | Sbjct 446 AATTTCTACCTTTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGC 387 Query 165401 TCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCA 165460 || | || || | || ||||| ||| | || || || ||||||||||| || ||||| Sbjct 386 ACATGTAGATTTTAGTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCCA 327 Query 165461 CGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC-GACTTATCG 165519 ||| || |||||||| ||||| |||||| | | ||| |||||| || | | || || Sbjct 326 CGG-GCTTTTGCACTAATAGGGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTCA 268 Query 165520 GTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTT 165579 | | ||| ||||| || | |||||||||| |||||| | || ||| ||| | Sbjct 267 AT-TGNNNNNTTATAATGCAATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTAT 209 Query 165580 TTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAG 165639 |||||| ||||| || || |||| |||||||| |||||| || || || |||| Sbjct 208 TTCTTAGTTATCCACTCGG-CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCAG 150 Query 165640 CAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTC 165699 |||| || |||||| | || ||| ||||||| || ||||| |||||| |||||| |||| Sbjct 149 CAATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTTC 90 Query 165700 ACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGG 165754 | |||||||| | || || | ||||||| || || || | | |||||||| Sbjct 89 ATATGATGGGATTTGCCGGAGTATTAGGCGTGGCTTTTCTATGCACTATTCATGG 35 >seq747441 Length=209 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 165457 TCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC-GACTT 165515 ||||||| || |||||||| |||||||||||| | ||||| |||||||| || | | || Sbjct 1 TCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTG 60 Query 165516 ATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGT 165575 || | | || ||||| ||||| || | |||||| |||| ||| ||| || ||| Sbjct 61 TTCAAT-TGCGGCCTTATAATGCAATCTCATTCTCTCGTCCAATTTTTGTTTTTGTTTCG 119 Query 165576 GTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTC 165635 || || ||||| ||||| ||||| ||||| |||||||| || ||| || || || Sbjct 120 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTA 179 Query 165636 GCAGCAATCTTCCGATTCCTGCTCTTCCTC 165665 ||||| || || |||||| | || ||| || Sbjct 180 GCAGCGATATTTCGATTCATCCTTTTCTTC 209 >seq542521 Length=235 Score = 107 bits (118), Expect = 2e-18 Identities = 168/237 (71%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 165194 TTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTG 165253 |||||| || |||||||| || | || ||||| ||||||| | ||| | |||||||| Sbjct 1 TTTTGTAGGATGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTG 60 Query 165254 GCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCT 165313 | |||| ||||| ||||| || || ||||||||| || ||| | | ||||| ||| | Sbjct 61 GTTTACAGGGACAACTTTTGTAACTTCTTGGTATACCCATGGATTGGAAAGTTCATATTT 120 Query 165314 TGAGGG-TGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCAT 165371 || | || || ||||||| | | ||||||||||| || || | | | | || Sbjct 121 GGAATGATGTAA--TTTCTTAACCACAGCAGTTTCTACCCCTGCCAATAGTTTAGCACAC 178 Query 165372 TCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAA 165428 ||| | |||| |||||||| || || | ||||||| || | || ||||| ||| Sbjct 179 TCTTTGTTGCTACTATGGGGGCCAGAAGCATAAGGGGATTTTACTCGTTGGTGTCAA 235 >seq2075000 Length=209 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 165468 TTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCG 165526 |||||||| |||||||||||| | ||||| |||||||| || || || || | | || Sbjct 207 TTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCG 149 Query 165527 TCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTAT 165586 ||||| ||||| || | ||||||||||| ||| ||| ||| || | | || |||| Sbjct 148 GCCTTATAATGCAATCTCATTCTCTGGTCCAATTTTTGTTTTCATTTCTTTATTCCTTAG 89 Query 165587 GTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTT 165646 ||||| || || ||||| |||||||| || ||| || || ||||| || || Sbjct 88 TTATCCACTAGGGCAATCTAGTTGGTTCTTTGCGCCGAGTTTTCATGTAGCAGCGATATT 29 Query 165647 CCGATTCCTGCTCTTCCTCCAAGGGTT 165673 ||||| | || ||| ||||||| || Sbjct 28 TTGATTCATTCTTTTCTTCCAAGGATT 2 >seq124049 Length=9620 Score = 96.9 bits (106), Expect = 4e-15 Identities = 236/349 (68%), Gaps = 13/349 (4%) Strand=Plus/Plus Query 165465 GCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTAT 165523 || ||| |||| |||||||||||| || |||||||| || || || || | | Sbjct 9255 GCTTTTACACTAATAGGTTTCATGNNNNNNCAATTTGAACTTGCTCGGTCTGTTCAAT-T 9313 Query 165524 TCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCT 165583 | ||||| ||||| || | ||||||||||| |||| | || | | ||| || || Sbjct 9314 GCAACCTTATAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTCCT 9373 Query 165584 TATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAAT 165643 ||| | ||| ||||| ||||| | |||||| || | | || || |||| |||| Sbjct 9374 TATTTGTCCACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGG---CGCAACAAT 9430 Query 165644 CTTCC---GATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCA 165700 | | ||||| | || ||| ||||||| || ||||| ||| | || | || ||||| Sbjct 9431 GATACTTTGATTCATCCTTTTCTTCCAAGGATTTCATAA-TGGGAGTTGTACCCATTTCA 9489 Query 165701 CATGATGGGCGTAGCAGGTATCTTAGGC-GGAGCATTGCTTTCTGCCATTCATGGTGTTA 165759 |||||||| | || || | |||||| ||| || || | || |||||||| | | Sbjct 9490 TATGATGGGATTTGCCGGAGTATTAGGCATGAGTCTT-CTATGCGCTATTCATGGAGCAA 9548 Query 165760 CAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACA-CTTTCA 165807 | |||| || ||| | | | | |||| ||| ||||| | |||||| Sbjct 9549 C-CTAGAAAACACTCTATTTTAGGATGATGATGGTGCAAATACCTTTCA 9596 >seq780762 Length=275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 164828 TGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCT 164887 ||||| || | ||||||||||| || || |||||||| |||||||| ||||||||| Sbjct 274 TGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCT 215 Query 164888 CACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 |||||||||||||| ||| | ||||||| ||| Sbjct 214 CACAACTTCCCTCTAGACTTAGCTGCTGTTGA 183 >seq188012 Length=2438 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 164253 CTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCG 164312 |||| |||||| |||||||||||||| || |||||| |||||||||||||||||| | Sbjct 2349 CTTATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTG 2408 Query 164313 TAGCATACTCTGCTCCTGTCGCTGCAGC 164340 | ||||| || |||||||| || || || Sbjct 2409 TTGCATATTCAGCTCCTGTTGCAGCTGC 2436 >seq1480420 Length=245 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 165165 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 165224 || |||||| |||| ||||||||||||||||| || |||||||| || | || ||| Sbjct 138 GATGACTGGTGGCAAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 197 Query 165225 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTT 165271 || ||||||| | ||| | ||||||| | |||| ||||| ||||| Sbjct 198 CCTTGTGCTTATTTCGCTTTAGGGGGTTCGTTTACAGGGACAACTTT 244 >seq272447 Length=1912 Score = 86.0 bits (94), Expect = 7e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 165747 ATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTC 165806 ||||| | || | |||||| || ||| | | | | || | ||| ||||| || ||| Sbjct 708 ATTCACAGAGTAAAAGTAGAAAACACTATATTTTAGGACGATGATGGTGCAAATACCTTC 767 Query 165807 AAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTC 165866 || ||| | ||||| | || ||||||||||| || ||||||||||||||| Sbjct 768 CGCGCTTTTAAACCAACTCAAGTTGAAGAAACTTATTCGGTGATCACTGCTAACCGTTAT 827 Query 165867 TGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATG 165923 ||||| || || ||||| ||||||| |||||| || ||| | | ||||||||| Sbjct 828 TGGTCCCAAATCATTGGTGTTGCTTTTTCCAATAAACGCTGGTTATATTTCTTTATG 884 >seq219505 Length=1904 Score = 86.0 bits (94), Expect = 7e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 165948 TGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTG 166007 |||| ||| ||||||| | ||||| | ||||| || | |||| ||||| ||||| Sbjct 1899 TGGATGAGTGCTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTT 1840 Query 166008 TCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATC 166067 || |||| || | || || || ||||| || | ||| || || | || ||||| || Sbjct 1839 TCCTAGGAAATCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATT 1780 Query 166068 CTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTT 166127 || | || || || | |||| ||| ||| | | || ||||||||||| || || Sbjct 1779 CTTTTAAACGAGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTT 1720 Query 166128 GTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 | |||||||| || | ||||| | || ||| | |||||| Sbjct 1719 ATATTCCCTGAGGAGGCTCTGCCACGTGGAAACACTCTTTAA 1678 >seq56660 Length=239 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 13605 CTTGGGCGATTAACTCAGCGGTAGAGTGCCTCCTTTACACGGAGTAGGTCGGGGGTTCGA 13664 || ||| | ||| ||||||||||||| | ||||||||||||||| |||||||||||||| Sbjct 130 CTGGGGGGCTTAGCTCAGCGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGGGGTTCGA 71 Query 13665 ATCCCTCATCGCCCA 13679 | |||||| | |||| Sbjct 70 AACCCTCAGCACCCA 56 >seq1383633 Length=301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/209 (67%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 164114 TCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAA 164173 |||||| || |||| ||| ||| | || ||||| ||||| ||||| | ||||| Sbjct 92 TCTGGTACTATTATTCCTACTTTTGCGGCGATCGGATTGCACGGTTACCCAGTTAGGGAA 151 Query 164174 GCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCAC 164233 | ||| | | || || ||| || || ||||||||| | || |||| | ||| Sbjct 152 GATGCATCTATTGATGAGTGGTCATAAAATTGTGGTCCTTATAAGCTAATTGTTCTGCAC 211 Query 164234 TTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTTGGT 164293 ||| | || ||||||||||||||||||||| || |||||| ||| Sbjct 212 TTCTTACTTNNNNNNNNNNNNNNNATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 271 Query 164294 ATGCGTCCTTGGATTTGCGTAGCATACTC 164322 ||||||||||||||| || ||||| || Sbjct 272 ATGCGTCCTTGGATTGCTGTTGCATATTC 300 >seq1984290 Length=1936 Score = 82.4 bits (90), Expect = 8e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 164861 ATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGAG 164920 |||||||| |||||||| ||||||||||||||||||||||| ||| | ||||||| |||| Sbjct 1936 ATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACTTGGCTGCTGTTGAG 1877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543170017057320