Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 2e-13 >seq7 Length=22540073 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||||||||| || || || ||||| | | ||| || |||||||| || || Sbjct 17337740 AGGCACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTG 17337681 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| ||| || ||||| | |||||| || || ||| || || ||||| || Sbjct 17337680 AGCCCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGC-GCAGAAGGAGCCCGAGAA 17337622 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| || ||||| || | || || |||| Sbjct 17337621 GAAGATCCCCTCGACGCAGGCGAACGCGA 17337593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414323287840