Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq6 120 3e-22 seq4 113 4e-20 seq2 113 4e-20 seq1 100 2e-16 seq9 84.2 2e-11 >seq5 Length=20807039 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||||| ||||||||||| || ||||| || || ||| Sbjct 6507200 CCACCACGGAGACGGAGCACCAGATGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCC 6507259 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || | ||||||||||| ||||| ||| | || || | |||||||||| ||| Sbjct 6507260 AAGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAATATGAGGCGCTGCTGGTCCGGGGGA 6507319 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | | | || || | ||| Sbjct 6507320 ATGCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTGTCAATCGTGTCTGACGACTCAACC 6507379 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||||| |||||||| || || |||||||| |||||||| Sbjct 6507380 TCTAGCGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 6507426 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||||| || | |||||| |||||||||||||| ||||| || ||||| | Sbjct 6507437 AGCCTGAGCACCAGGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCAGCAAGGGTGCGT 6507496 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 ||||||| ||||| ||||| ||| | || || | ||||||||| || | ||||||| Sbjct 6507497 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGTGGAATGCCTTCC 6507556 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| ||||| ||||| | ||| || || | ||| || | ||| Sbjct 6507557 TTGTCCTGAATCTTCGCCTTCACGTTATCGATTGTGTCTGACGACTCAACCTCAAGTGTA 6507616 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||||| || | || |||||||| || ||||| Sbjct 6507617 ATGGTCTTGCCTGTCAGGGTCTTGACAAAAATCTGCAT 6507654 Score = 109 bits (120), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||||||||||| || ||||| ||||| || Sbjct 2856287 CCGCCACGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 2856346 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | |||||||||| ||| Sbjct 2856347 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 2856406 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || || || |||| Sbjct 2856407 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 2856466 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||| || |||||||| || || | || || || || || ||||| ||||| Sbjct 2856467 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGAA 2856519 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | ||||||||||| |||||||| |||||||| || || || | ||| Sbjct 16644178 AGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCGAGAGTACGGCCATCC 16644119 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| || | || || | ||||||||| ||| | ||| |||||||| Sbjct 16644118 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 16644059 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | ||| || || | ||| || | ||||||||| Sbjct 16644058 TGGATCTTCGCCTTCACATTGTCGATCGTGTCTGATGACTCAACCTCGAGTGTAATGGTC 16643999 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| || | || || || || || |||||| Sbjct 16643998 TTGCCAGTAAGGGTCTTCACGAAGATCTGCATT 16643966 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||| || |||||||| || || || ||||| || ||||||| || || |||||| Sbjct 6507914 GTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCC 6507973 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| || | || |||||||| ||||| ||| Sbjct 6507974 GCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCTTTG 6508033 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| |||||| || || || | ||| ||||||||||| || | || Sbjct 6508034 ACATTGTCGATTGTATCAGAGGATTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTC 6508093 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 6508094 TTCACAAAGATCTGCAT 6508110 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || || || || || | | ||||| ||||| ||||| Sbjct 16643935 GTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTGCCATCCTCGAGCTGCTTGCCA 16643876 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| ||| | || |||||||| |||||| || Sbjct 16643875 GCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCCTTG 16643816 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | |||||| | |||| || | ||| || |||||||| || || || Sbjct 16643815 ACATTGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTC 16643756 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 16643755 TTAACGAAGATTTGCAT 16643739 >seq6 Length=21016138 Score = 120 bits (132), Expect = 3e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 |||||||| |||| || | || |||||||| || ||||| ||||| || ||||| || Sbjct 18970222 AGCCTGAGAACCAGGTGGAGGGTAGACTCCTTCTGNATGTTGTAGTCAGCAAGGGTGCGG 18970163 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 ||||||||||||| ||||| ||| | || || | |||||||||| ||| | ||| ||| Sbjct 18970162 CCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCC 18970103 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| ||| || | | | | || || || ||| || | || Sbjct 18970102 TTGTCCTGGATCTTGGCTTTAACGTTGTCAATCGTGTCCGAGGACTCGACCTCAAGCGTG 18970043 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||||| || | || ||||| || || ||||| Sbjct 18970042 ATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 18970005 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||||| || | ||| |||||||| || ||||| ||||| |||||||| | Sbjct 18969766 AGCCTGAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGT 18969707 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||||||||| ||||| ||| | || || | |||||||||| ||| | ||| ||| Sbjct 18969706 CCATCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 18969647 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| || || | | ||| || ||| | ||| || | ||| Sbjct 18969646 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACCTCAAGGGTG 18969587 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| || || || || || || || || ||||| Sbjct 18969586 ATCGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 18969549 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | ||||| ||||| || ||||| || ||||| ||||| || | ||| Sbjct 18970444 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCC 18970385 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || || | ||||||||| || | ||| |||||||| Sbjct 18970384 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCC 18970325 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | | ||| ||| || ||| |||| ||| |||||| Sbjct 18970324 TGGATCTTGGCCTTCACATTGTCAATAGTGTCAGAGGACTCAACCTCCAGGGTGATGGTC 18970265 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || || || || || ||||| Sbjct 18970264 TTGCCGGTAAGGGTCTTCACGAAGATCTGCAT 18970233 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||||| || | ||||| ||||| || ||||| ||||| || || || || Sbjct 18969994 AGCCTGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGG 18969935 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||||||||| ||||| ||| | || || | |||||||||| ||| | || ||| Sbjct 18969934 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCC 18969875 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| ||||| | | ||| || || || ||| || | || Sbjct 18969874 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTG 18969815 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || || | || ||||| || || ||||| Sbjct 18969814 ATGGTCTTCCCAGTCAGGGTCTTGACGAAGATCTGCAT 18969777 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||| | || | ||||||||||| || ||||| ||||| |||| ||| || Sbjct 18969538 AGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGG 18969479 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||| ||||| ||||| || | || || | ||||||||| ||| | ||| ||| Sbjct 18969478 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCC 18969419 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| || || | | | | || || || ||| || | ||| Sbjct 18969418 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 18969359 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||||| || | || || ||||| || ||||| Sbjct 18969358 ATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 18969321 >seq4 Length=23326293 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | |||| ||| || ||||| |||||||||||||| || Sbjct 20245434 CCTCCACGAAGGCGGAGGACAAGGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCAGCA 20245375 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| ||| | ||||| | ||||||||| || Sbjct 20245374 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGTGGA 20245315 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| |||| | | | | || ||| || ||| Sbjct 20245314 ATACCTTCCTTGTCCTGGATCTTGGCCTTCATGTTGTCAATTGTGTCAGAGGACTCAACC 20245255 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || || || || ||||| Sbjct 20245254 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 20245208 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||| || || | || | |||||||||||| || ||||||||||| || Sbjct 20245662 CCACCACGGAGCCGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCA 20245603 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| || || ||| | || || | ||||||||| || Sbjct 20245602 AGGGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGG 20245543 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | ||| || ||| | ||| Sbjct 20245542 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAAACGACTCAACC 20245483 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || | || || || || || ||||| Sbjct 20245482 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 20245436 Score = 102 bits (112), Expect = 7e-17 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | || || | |||| ||||| ||||| |||||||||||||| Sbjct 20244980 TTCCGCCACGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTCTGAATGTTATAGTC-- 20244923 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| || | ||||| ||||| ||||| ||| | ||||| |||||||||| | Sbjct 20244922 CAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGGTGCTGCTGGTCCGGAG 20244863 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| ||||| ||||| | | | | || || || ||| Sbjct 20244862 GGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGGACTCTA 20244803 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||| ||| ||||||||||| || | || || || || || ||||| | ||| Sbjct 20244802 CCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATCTGCATCTGGAA 20244748 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| || || || || || |||||||| || || ||||| | | ||||| ||||| Sbjct 20245182 TGCAGGGTTGATTCTTTCTGGATGTTATAATCAGCAAGGGTGCGACCATCCTCAAGCTGC 20245123 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || | || || | |||||| || ||| | ||| ||||| || |||||| Sbjct 20245122 TTGCCAGCGAAGATGAGGCGCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGGATCTTG 20245063 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | | | | |||||| || ||| |||| ||| ||||||||||| || Sbjct 20245062 GCCTTCACATTGTCAATTGTATCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTA 20245003 Query 21153 AACGTTTTGACAAATATTTGCATT 21176 | || || ||||| || |||||| Sbjct 20245002 AGAGTCTTCACAAAGATCTGCATT 20244979 >seq2 Length=26406337 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || ||||| || ||||||||||||| ||||| Sbjct 2676594 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCCAGCTGCTTGCCG 2676653 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || | |||||||||| || | || |||||||| |||||| || Sbjct 2676654 GCAAAAATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTG 2676713 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | |||| || | ||| ||||||||||| || | || Sbjct 2676714 ACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTC 2676773 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 2676774 TTCACGAAGATCTGCAT 2676790 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| | ||||||||||||| ||||| Sbjct 2677050 GTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCG 2677109 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| ||| | ||| |||||||| |||||| || Sbjct 2677110 GCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2677169 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | |||| || | ||| |||||||||||||| | || Sbjct 2677170 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTC 2677229 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 2677230 TTGACAAAGATCTGCAT 2677246 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| | ||||||||||||| ||||| Sbjct 2676822 GTCGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCGTCCTCCAGCTGCTTGCCG 2676881 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| ||| | ||| |||||||| |||||| || Sbjct 2676882 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2676941 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||| || | |||| || | ||| ||||||||||| || | || Sbjct 2676942 ACATTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 2677001 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 2677002 TTCACGAAGATCTGCAT 2677018 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| | | ||||||||||| ||||| Sbjct 2677278 GTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2677337 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | ||| ||||| || |||||| || Sbjct 2677338 GCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTAGCCTTG 2677397 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || ||| || |||| || | ||| || ||||||||||| || || Sbjct 2677398 ACGTTGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAATGTC 2677457 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 2677458 TTCACGAAGATCTGCAT 2677474 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||| ||||| ||||| || || || ||| Sbjct 20340231 CCTCCACGAAGGCGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCC 20340290 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | ||||||||||||| || || ||| | || || ||||||||||| || Sbjct 20340291 AATGTGCGCCCGTCCTCCAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGCGGG 20340350 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||| ||| || || | | | | || || | |||| Sbjct 20340351 ATGCCCTCCTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTGTCGGAGCTCTCCACC 20340410 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||||||||| | || || ||||| || ||||| Sbjct 20340411 TCCAGAGTTATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCAT 20340457 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||||||||| || ||||| || || ||| || | ||||| || || ||||| Sbjct 20340945 GTGGATTCCTTTTGAATATTGTAGTCAGCGAGTGTTCGGCCATCCTCTAGTTGCTTGCCA 20341004 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || ||||| ||||| ||| | ||| | |||||| |||||| ||| Sbjct 20341005 GCAAAAATCAGCCTCTGTTGGTCTGGGGGGATGCCCT-CTTGTCCTGGATCTTGGCTTTG 20341063 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || ||| || | || |||||||||||||| || || Sbjct 20341064 ACATTGTCGATGGTGTCGGAAATCTCAACCTCAAGAGTGATGGTCTTGCCGGTCAAAGTC 20341123 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 20341124 TTAACAAAGATCTGCAT 20341140 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || |||||||| || ||||| ||||| || Sbjct 2676336 CCACCACGAAGGCGGAGCACCAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCG 2676395 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||||||| ||||| || | || || | |||||||||| ||| Sbjct 2676396 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGA 2676455 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| ||||| | | | || || | ||| Sbjct 2676456 ATCCCCTCCTTATCCTGTATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 2676515 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || || || ||||| || || ||||| Sbjct 2676516 TCCAGAGTGATGGTCTTCCCAGTCAAGGTCTTGACGAAGATCTGCAT 2676562 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | ||| |||| || | ||| |||||||| |||||||| || || ||| Sbjct 20340459 CCTCCTCTGAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCC 20340518 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | |||| ||||||||||| || ||| | || || |||||||| || | Sbjct 20340519 AATGTGCGCCCGTCTTCCAGCTGTTTCCCAGCAAATATTAGCCTCTGCTGATCAGGAGAG 20340578 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| |||||| | ||| Sbjct 20340579 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTATCAGAGCTCTCTACC 20340638 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || || | || || ||||| |||||||| Sbjct 20340639 TCAAGAGTGATAGTCTTTCCTGTAAGGGTCTTCACAAAGATTTGCAT 20340685 >seq1 Length=32922458 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| || |||||||| || ||||| ||||| || Sbjct 9819711 CCGCCGCGGAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9819652 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || | || || | |||||||||| || Sbjct 9819651 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 9819592 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || || || |||| Sbjct 9819591 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9819532 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||| || || ||||| || || | || || || || || ||||| || Sbjct 9819531 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9819482 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | |||| || |||||||| || ||||| ||||| || Sbjct 18387270 CCGCCGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCA 18387211 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||||||||| ||||| || | || || | |||||||||| ||| Sbjct 18387210 AGCGTGCGGTCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCC---GGC 18387154 Query 21069 ACG---CCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 | | ||||||||||| | ||| ||||| | || || || | | |||| Sbjct 18387153 ATGATTCCTTCCTTGTCCTGCACCTTCGCCTTCACGTTCTGGATCGTGTCGCTGCTCTCC 18387094 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||| || |||||||| ||||| | || || || || || ||||| || Sbjct 18387093 ACCTCCAGCGTGATGGTCTTCCCGGTCAGGGTCTTCACGAAGATCTGCATCTT 18387041 >seq9 Length=15534364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | || |||||||| || ||||| ||||| ||| Sbjct 11741023 CCGCCGCGGAGGCGGAGCACAAGGTGAAGCGTCGACTCCTTGTGGATGTTGTAGTCGGCC 11740964 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 || ||| || ||||||||||||| || || || |||| || | |||||||||| Sbjct 11740963 AGTGTTCGGCCGTCCTCCAGCTGCTTCCCGGCGAAAATCAGACGCTGCTGGTCC 11740910 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 15313822 CCACCGCGGAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCA 15313763 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| || ||||||||||||| ||||| || | || || | |||||||||| Sbjct 15313762 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGCCGCTGCTGGTCC 15313709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259138244592