Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq5 145 9e-30 seq2 131 2e-25 seq6 116 4e-21 seq1 100 3e-16 seq4 93.3 5e-14 seq8 91.5 2e-13 seq10 82.4 9e-11 seq7 82.4 9e-11 >seq5 Length=20807039 Score = 145 bits (160), Expect = 9e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| |||||| ||| |||||| || || |||||||| |||| || || | Sbjct 6507211 ACGGAGCACCAGATGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGGCC 6507270 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| |||||||| ||||||||||| | || | || |||||| Sbjct 6507271 ATCCTCCAGCTGCTTGCCAGCAAATATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 6507330 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | |||| | ||| | | | |||||| ||| || || || | ||| | Sbjct 6507331 GTCC-TGAATCTTTGCCTTCACGTTGTCAATCGTGTCTGACGACTCAACCTCTAGCGTAA 6507389 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||||| || | ||||| |||||||||||||| Sbjct 6507390 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 6507426 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||| |||| ||||| | || || |||||||| |||||||| Sbjct 6507692 TCCTTCTGAATATTGTAATCTGCCAACGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAG 6507751 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || |||||||| || | || | || |||||||||| |||||| || | ||| Sbjct 6507752 ATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTCA-CGTT 6507810 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || || | |||||||| || || || | ||||| || Sbjct 6507811 GTCGATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 6507870 Query 43172 AAAGATTTGCATT 43184 |||||| |||||| Sbjct 6507871 AAAGATCTGCATT 6507883 Score = 111 bits (122), Expect = 2e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || || || || || | || | |||||| || | ||| |||||| ||||| ||||| Sbjct 16644199 TACTGACCACCCCTGAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAG 16644140 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || || ||||| || | || || |||||||| || ||||| || || ||||||||||| Sbjct 16644139 TCCGCGAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCT 16644080 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT 43130 | || | || |||||||||| ||| || || | | | | |||||| || Sbjct 16644079 GGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCTGATGAC 16644020 Query 43131 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || |||| || ||||| ||||| || || ||||| || ||||| |||||| Sbjct 16644019 TCAACCTCGAGTGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATT 16643966 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2856322 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 2856381 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 2856382 GATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 2856440 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 2856441 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 2856500 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 2856501 CGAAGATCTGCATCTT 2856516 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| ||||| ||| | || || |||||||| || || || Sbjct 16643702 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGCCCATCTTCGAGCTGCTTGCCGGCAAA 16643643 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||| ||| ||| || |||| | Sbjct 16643642 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGACATT 16643583 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || |||| || ||||| ||||| || || ||||| || Sbjct 16643582 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 16643523 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 16643522 AAAGATCTGCAT 16643511 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||| ||||||| | || || |||||||| ||||| || Sbjct 16643930 CTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAA 16643871 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | |||||||||| ||| | |||| |||| Sbjct 16643870 GATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCC-TGAATCTTTGCCTTGACAT 16643812 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || ||||| || | ||||| || ||||| || | ||||| | Sbjct 16643811 TGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTAA 16643752 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 16643751 CGAAGATTTGCAT 16643739 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| ||||| || || || |||| || |||||||| || || || Sbjct 6507464 TCCTTTTGAATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAG 6507523 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| | || | || | | Sbjct 6507524 ATGAGGCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC-TGAATCTTCGCCTTCACGTT 6507582 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||| || || || | || ||||| ||||| || || ||||| || Sbjct 6507583 ATCGATTGTGTCTGACGACTCAACCTCAAGTGTAATGGTCTTGCCTGTCAGGGTCTTGAC 6507642 Query 43172 AAAGATTTGCAT 43183 ||| || ||||| Sbjct 6507643 AAAAATCTGCAT 6507654 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || ||||| |||||||| || || || || |||| || || ||||| || || || Sbjct 6507919 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCCGCAAA 6507978 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | | |||||||||| ||| | || | ||||| Sbjct 6507979 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC-TGAATCTTGGCTTTGACAT 6508037 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || ||||| || || | || ||||| ||||| || || ||||| | Sbjct 6508038 TGTCGATTGTATCAGAGGATTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCA 6508097 Query 43171 CAAAGATTTGCATTTTTAC 43189 ||||||| ||||| | ||| Sbjct 6508098 CAAAGATCTGCATCTGTAC 6508116 >seq2 Length=26406337 Score = 131 bits (144), Expect = 2e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| ||||| ||||||||||||||||||| || ||| |||| || Sbjct 20340249 ACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAATGTGCGCCCGTCCTCC 20340308 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| ||||| || ||||| | ||||||||| | ||| | || |||||||||| | Sbjct 20340309 AGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 20340368 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 |||||| || | | | | ||||| |||| ||||| || | || ||||| Sbjct 20340369 ATTTTTGCCTTAACATTGTCAATTGTGTCGGAGCTC---TCCACCTCCAGAGTTATGGTC 20340425 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || ||||| |||||||| ||||| Sbjct 20340426 TTGCCGGTAAGAGTCTTCACAAAGATCTGCAT 20340457 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| |||| || |||||||| || || || Sbjct 2677055 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAA 2677114 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2677115 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2677173 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || ||||| |||| |||||||| ||||| || || ||||| | Sbjct 2677174 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGA 2677233 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 2677234 CAAAGATCTGCAT 2677246 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| |||| || |||||||| || ||||| Sbjct 2676827 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAA 2676886 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 2676887 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2676946 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || ||||| || | |||||||| ||||| || || ||||| || Sbjct 2676947 GTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 2677006 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 2677007 GAAGATCTGCAT 2677018 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || || || Sbjct 2676599 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAA 2676658 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | ||| | | |||||||||| ||| || |||| ||| Sbjct 2676659 AATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2676717 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | |||||||| ||||| || || |||| Sbjct 2676718 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCT 2676774 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 2676775 TCACGAAGATCTGCAT 2676790 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || |||| | || || |||||||| |||||||| Sbjct 2677283 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 2677342 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||| ||| ||| || |||| ||| Sbjct 2677343 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTAGCCTTGA-CGT 2677401 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||| || ||||| || | ||||| | Sbjct 2677402 TGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCA 2677461 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 2677462 CGAAGATCTGCAT 2677474 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | || | ||||| || | || |||||| ||||| |||||||||||| Sbjct 20340459 CCTCCTCTGAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCC 20340518 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || ||| |||| || ||||| || ||||| ||||| || | |||||| || | | Sbjct 20340519 AATGTGCGCCCGTCTTCCAGCTGTTTCCCAGCAAATATTAGCCTCTGCTGATCAGGAGAG 20340578 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| ||| || |||| | | | || || |||| || Sbjct 20340579 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTATCAGAGCTC---TCT 20340635 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| || || || || || ||||| |||||||||||||| Sbjct 20340636 ACCTCAAGAGTGATAGTCTTTCCTGTAAGGGTCTTCACAAAGATTTGCAT 20340685 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||||| || || || | || ||||| ||||| ||||| || Sbjct 20340951 TCCTTTTGAATATTGTAGTCAGCGAGTGTTCGGCCATCCTCTAGTTGCTTGCCAGCAAAA 20341010 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | ||| ||||| | || | || || ||||||| ||| || ||||| | Sbjct 20341011 ATCAGCCTCTGTTGGTCTGGGGGGATGCCCT-CTTGTCCTGGATCTTGGCTTTGACATTG 20341069 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| || || || | |||||||| ||||| || | ||||| ||| Sbjct 20341070 TCGATGGTGTCGGAAATCTCAACCTCAAGAGTGATGGTCTTGCCGGTCAAAGTCTTAACA 20341129 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 20341130 AAGATCTGCAT 20341140 >seq6 Length=21016138 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || |||| || |||||||| || || || Sbjct 18970196 CTCCTTCTGNATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAA 18970137 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| || | || | || | ||| Sbjct 18970136 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGGATCTTGGCTTTAACGT 18970078 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || || | ||||||||| ||||| || || ||||| | Sbjct 18970077 TGTCAATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCTGTCAGGGTCTTGA 18970018 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 18970017 CGAAGATCTGCAT 18970005 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||| || || | || || |||||||| |||||||| Sbjct 18969512 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 18969453 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 18969452 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18969393 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 18969392 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 18969333 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 18969332 AAAGATCTGCAT 18969321 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | ||| ||||| || || |||||||| || || || || | || || Sbjct 18970442 CACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 18970383 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||||||||| || || || ||||||||||| | ||| | || |||||||||| Sbjct 18970382 CAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTG 18970323 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | ||||| || || || || | |||||||| || Sbjct 18970322 GATCTTGGCCTTCACATTGTCAATAGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTT 18970263 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| || ||||| ||||| Sbjct 18970262 GCCGGTAAGGGTCTTCACGAAGATCTGCAT 18970233 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| ||||| || | || || |||||||| || || || Sbjct 18969967 TCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 18969908 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 18969907 ATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 18969849 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || |||| ||||||||| || || || || ||||| || Sbjct 18969848 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTCCCAGTCAGGGTCTTGAC 18969789 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 18969788 GAAGATCTGCAT 18969777 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||||||| || || | || || |||||||| || || || Sbjct 18969740 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCAAA 18969681 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 18969680 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 18969622 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | ||||| || || || || | ||||| | Sbjct 18969621 TGTCGATGGTGTCAGACGACTCGACCTCAAGGGTGATCGTCTTACCAGTCAAGGTCTTCA 18969562 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 18969561 CGAAGATCTGCAT 18969549 >seq1 Length=32922458 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || || || || || | || || Sbjct 9819694 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTC 9819635 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || || ||||||||||| | ||| | | |||||||||| Sbjct 9819634 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 9819575 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | ||||| || ||||| || | |||||| || | Sbjct 9819574 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 9819516 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | ||||| || ||||| || ||||| ||||| || Sbjct 9819515 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9819482 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || ||||| || |||||||| || ||||| Sbjct 18387235 CTCCTTCTGGATGTTGTAGTCGGCAAGCGTGCGGTCGTCCTCCAGCTGCTTGCCGGCGAA 18387176 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACG---CTCTCCTTGTCCATGATTTTTTGTTTGAG 43108 ||||| |||||||||| |||||| | | ||||||||| | || || | Sbjct 18387175 GATGAGCCGCTGCTGGT---CCGGCATGATTCCTTCCTTGTCCTGCACCTTCGCCTTCAC 18387119 Query 43109 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 || | ||||||||| ||||| || | ||||||||| || || || || ||||| Sbjct 18387118 GTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTCCCGGTCAGGGTCTT 18387059 Query 43169 TACAAAGATTTGCATTTT 43186 || ||||| ||||| || Sbjct 18387058 CACGAAGATCTGCATCTT 18387041 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||| | || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 24567708 AAAAGTTTACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 24567767 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 24567768 TCACCACTATACTAC 24567782 >seq4 Length=23326293 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || || || || || || || ||| | || || |||||||| ||||| || Sbjct 20245627 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAA 20245568 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||| ||| || || | ||| Sbjct 20245567 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCA-CGT 20245509 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | |||||||| ||||| || || ||||| | Sbjct 20245508 TGTCGATGGTGTCAAACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAA 20245449 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 20245448 CGAAGATCTGCAT 20245436 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| || || ||||| ||||| || | || || |||||||| ||||| || Sbjct 20245398 TCCTTCTGAATGTTATAGTCAGCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 20245339 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | ||||||||| ||| || || | | Sbjct 20245338 ATAAGACGCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCATGTTG 20245279 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 20245278 TCAATTGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACG 20245219 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 20245218 AAGATCTGCAT 20245208 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||| || || ||| ||||||||| |||| |||||||||||||||| ||||| Sbjct 4154526 AAAAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACT 4154585 Query 60118 CACCACTATACTAC 60131 |||||||||||||| Sbjct 4154586 CACCACTATACTAC 4154599 >seq8 Length=20165712 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| ||||| ||||| || | || || |||||||| || ||||| Sbjct 3967766 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTACGGCCTTCCTCGAGCTGCTTGCCGGCGAA 3967825 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| ||||||||||| | || | || |||||||||| Sbjct 3967826 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 3967865 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| ||||| ||||| || | || || |||||||| || || || Sbjct 3967538 CTCCTTCTGAATATTGTAGTCAGCAAGAGTACGGCCTTCCTCAAGCTGCTTGCCGGCAAA 3967597 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| |||||||| || | || | | ||||| ||| ||| | || | || | Sbjct 3967598 GATGAGACGCTGCTGATCAGGAGGGATCCCTTCCTTATCC-TGAATCTTCGCCTTCACAT 3967656 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | ||||| || ||||| || || ||||| | Sbjct 3967657 TGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTCTTGCCGGTGAGGGTCTTGA 3967716 Query 43171 CAAAGATTTGCAT 43183 | ||||| | ||| Sbjct 3967717 CGAAGATCTTCAT 3967729 >seq10 Length=15557830 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/77 (84%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCG--GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||| || || || || ||| ||||||||| |||| |||||||||||||||| || Sbjct 7102426 AAAAATATTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAAT 7102367 Query 60115 ACTCACCACTATACTAC 60131 ||||||||||||||||| Sbjct 7102366 ACTCACCACTATACTAC 7102350 >seq7 Length=22540073 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||||||| |||||| || || ||||| |||||||| || || |||| || |||||| Sbjct 12970872 TGCAATGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGCGTACGGCCGTCGTCCAGCTGC 12970931 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || ||||| || || ||||||||||| | ||| Sbjct 12970932 TTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 12970966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817514227360