Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=26406337 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || || | ||| || ||||| || || || |||||||||||||| Sbjct 2677248 CCTCCCCTGAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCA 2677307 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | ||| |||| || ||||| || |||| || | || || || ||| Sbjct 2677308 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 2677367 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| |||||||| || | |||||| | ||| |||||| || ||| Sbjct 2677368 ATGCCCTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGGACTCCACC 2677427 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 |||| |||||| | |||||||||||||| || || || || ||||| | ||| Sbjct 2677428 TCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCACGAAGATCTGCATCTGTAA 2677480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343944520940