Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=26406337 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || || | || || ||| | Sbjct 20341140 ATGCAGATCTTTGTTAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGATTTCC 20341081 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| ||||| ||||| || ||||| || || || ||| Sbjct 20341080 GACACCATCGACAATGTCAAAGCCAAGATCCAGGACAA-GAGGGCATCCCCCCAGACCAA 20341022 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| | ||||||||||| || |||| | ||| || || || || Sbjct 20341021 CAGAGGCTGATTTTTGCTGGCAAGCAACTAGAGGATGGCCGAACACTCGCTGACTACAAT 20340962 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| ||||| || Sbjct 20340961 ATTCAAAAGGAATCCAC 20340945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935937121860