Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5 145 8e-30 seq2 127 2e-24 seq6 116 4e-21 seq4 98.7 1e-15 seq1 96.9 4e-15 seq8 91.5 2e-13 >seq5 Length=20807039 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| |||||| ||| |||||| || || |||||||| |||| || || | Sbjct 6507211 ACGGAGCACCAGATGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGGCC 6507270 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| |||||||| ||||||||||| | || | || |||||| Sbjct 6507271 ATCCTCCAGCTGCTTGCCAGCAAATATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 6507330 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | |||| | ||| | | | |||||| ||| || || || | ||| | Sbjct 6507331 GTCC-TGAATCTTTGCCTTCACGTTGTCAATCGTGTCTGACGACTCAACCTCTAGCGTAA 6507389 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||||| || | ||||| |||||||||||||| Sbjct 6507390 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 6507426 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| |||||||||||||| |||| ||||| | || || |||||||| |||||||| Sbjct 6507692 TCCTTCTGAATATTGTAATCTGCCAACGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAG 6507751 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || |||||||| || | || | || |||||||||| |||||| || | ||| Sbjct 6507752 ATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTCA-CGTT 6507810 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| || || || || | |||||||| || || || | ||||| || Sbjct 6507811 GTCGATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 6507870 Query 42197 AAAGATTTGCATT 42209 |||||| |||||| Sbjct 6507871 AAAGATCTGCATT 6507883 Score = 114 bits (126), Expect = 1e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 41974 TTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 42033 |||| |||| || || | || | |||||| || | ||| |||||| ||||| |||| Sbjct 16644201 TTTACTGACCACCCCTGAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGT 16644142 Query 42034 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 42093 | || || ||||| || | || || |||||||| || ||||| || || |||||||||| Sbjct 16644141 AGTCCGCGAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGT 16644082 Query 42094 CGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCG 42153 | | || | || |||||||||| ||| || || | | | | |||||| | Sbjct 16644081 CTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCTGATG 16644022 Query 42154 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || || |||| || ||||| ||||| || || ||||| || ||||| |||||| Sbjct 16644021 ACTCAACCTCGAGTGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATT 16643966 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2856322 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 2856381 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 2856382 GATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 2856440 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 2856441 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 2856500 Query 42196 CAAAGATTTGCATTTT 42211 | ||||| ||||| || Sbjct 2856501 CGAAGATCTGCATCTT 2856516 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| ||||| ||| | || || |||||||| || || || Sbjct 16643702 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGCCCATCTTCGAGCTGCTTGCCGGCAAA 16643643 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | | |||||| ||| ||| || |||| | Sbjct 16643642 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGACATT 16643583 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || || || |||| || ||||| ||||| || || ||||| || Sbjct 16643582 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 16643523 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 16643522 AAAGATCTGCAT 16643511 Score = 105 bits (116), Expect = 7e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| ||||| ||||| || || || |||| || |||||||| || || || Sbjct 6507464 TCCTTTTGAATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAG 6507523 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| ||||||||||| | ||| | || ||||||||| ||| | || | || | | Sbjct 6507524 ATGAGGCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC-TGAATCTTCGCCTTCACGTT 6507582 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||| || || || | || ||||| ||||| || || ||||| || Sbjct 6507583 ATCGATTGTGTCTGACGACTCAACCTCAAGTGTAATGGTCTTGCCTGTCAGGGTCTTGAC 6507642 Query 42197 AAAGATTTGCAT 42208 ||| || ||||| Sbjct 6507643 AAAAATCTGCAT 6507654 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || ||||| |||||||| || || || || |||| || || ||||| || || || Sbjct 6507919 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCCGCAAA 6507978 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | ||| | | |||||||||| ||| | || | ||||| Sbjct 6507979 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC-TGAATCTTGGCTTTGACAT 6508037 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || || ||||| || || | || ||||| ||||| || || ||||| | Sbjct 6508038 TGTCGATTGTATCAGAGGATTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCA 6508097 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 6508098 CAAAGATCTGCAT 6508110 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||| ||||||| | || || |||||||| ||||| || Sbjct 16643930 CTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAA 16643871 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||| | || | | |||||||||| ||| | |||| |||| Sbjct 16643870 GATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCC-TGAATCTTTGCCTTGACAT 16643812 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || || || ||||| || | ||||| || ||||| || | ||||| | Sbjct 16643811 TGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTAA 16643752 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 16643751 CGAAGATTTGCAT 16643739 >seq2 Length=26406337 Score = 127 bits (140), Expect = 2e-24 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||| ||||||||||||||||||| || ||| |||| || Sbjct 20340249 ACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAATGTGCGCCCGTCCTCC 20340308 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| ||||| || ||||| | ||||||||| | || | || |||||||||| | Sbjct 20340309 AGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 20340368 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 |||||| || | | | | ||||| |||| ||||| || | || ||||| Sbjct 20340369 ATTTTTGCCTTAACATTGTCAATTGTGTCGGAGCTC---TCCACCTCCAGAGTTATGGTC 20340425 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| |||||||| ||||| Sbjct 20340426 TTGCCGGTAAGAGTCTTCACAAAGATCTGCAT 20340457 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || |||| |||| || |||||||| || || || Sbjct 2677055 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAA 2677114 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2677115 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2677173 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || ||||| |||| |||||||| ||||| || || ||||| | Sbjct 2677174 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGA 2677233 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 2677234 CAAAGATCTGCAT 2677246 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || |||| |||| || |||||||| || ||||| Sbjct 2676827 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAA 2676886 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 2676887 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2676946 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || ||||| || | |||||||| ||||| || || ||||| || Sbjct 2676947 GTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 2677006 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 2677007 GAAGATCTGCAT 2677018 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || |||| | || || |||||||| |||||||| Sbjct 2677283 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 2677342 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||| ||| ||| || |||| ||| Sbjct 2677343 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTAGCCTTGA-CGT 2677401 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| || | ||||| || ||||| || | ||||| | Sbjct 2677402 TGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCA 2677461 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 2677462 CGAAGATCTGCAT 2677474 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | || | ||||| || | || |||||| ||||| ||||||||||| Sbjct 20340458 ACCTCCTCTGAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGC 20340517 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || ||| |||| || ||||| || ||||| ||||| || | |||||| || | | Sbjct 20340518 CAATGTGCGCCCGTCTTCCAGCTGTTTCCCAGCAAATATTAGCCTCTGCTGATCAGGAGA 20340577 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | |||||||||| ||| || |||| | | | || || |||| || Sbjct 20340578 GATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTATCAGAGCTC---TC 20340634 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || || || || || ||||| |||||||||||||| Sbjct 20340635 TACCTCAAGAGTGATAGTCTTTCCTGTAAGGGTCTTCACAAAGATTTGCAT 20340685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || || || Sbjct 2676599 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAA 2676658 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 2676659 AATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2676717 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| || | |||||||| ||||| || || |||| Sbjct 2676718 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCT 2676774 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||| ||||| Sbjct 2676775 TCACGAAGATCTGCAT 2676790 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||||||||| ||||| || || || | || ||||| ||||| ||||| || Sbjct 20340951 TCCTTTTGAATATTGTAGTCAGCGAGTGTTCGGCCATCCTCTAGTTGCTTGCCAGCAAAA 20341010 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | ||| ||||| | || | || || ||||||| ||| || ||||| | Sbjct 20341011 ATCAGCCTCTGTTGGTCTGGGGGGATGCCCT-CTTGTCCTGGATCTTGGCTTTGACATTG 20341069 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||| || || || | |||||||| ||||| || | ||||| ||| Sbjct 20341070 TCGATGGTGTCGGAAATCTCAACCTCAAGAGTGATGGTCTTGCCGGTCAAAGTCTTAACA 20341129 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 20341130 AAGATCTGCAT 20341140 >seq6 Length=21016138 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || || || |||| || |||||||| || || || Sbjct 18970196 CTCCTTCTGNATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAA 18970137 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| || | || | || | ||| Sbjct 18970136 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGGATCTTGGCTTTAACGT 18970078 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || || || || | ||||||||| ||||| || || ||||| | Sbjct 18970077 TGTCAATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCTGTCAGGGTCTTGA 18970018 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 18970017 CGAAGATCTGCAT 18970005 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || |||| || || | || || |||||||| |||||||| Sbjct 18969512 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 18969453 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 18969452 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18969393 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 18969392 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 18969333 Query 42197 AAAGATTTGCATTTTCAC 42214 |||||| ||||| | ||| Sbjct 18969332 AAAGATCTGCATCTGCAC 18969315 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||||| ||||| || | || || |||||||| || || || Sbjct 18969967 TCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 18969908 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 18969907 ATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 18969849 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| || || || |||| ||||||||| || || || || ||||| || Sbjct 18969848 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTCCCAGTCAGGGTCTTGAC 18969789 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 18969788 GAAGATCTGCAT 18969777 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| ||||| || || |||||||| || || || || | || || Sbjct 18970442 CACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 18970383 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||||||||| || || || ||||||||||| | || | || |||||||||| Sbjct 18970382 CAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTG 18970323 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | | | | ||||| || || || || | |||||||| || Sbjct 18970322 GATCTTGGCCTTCACATTGTCAATAGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTT 18970263 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| || ||||| ||||| Sbjct 18970262 GCCGGTAAGGGTCTTCACGAAGATCTGCAT 18970233 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||||||| || || | || || |||||||| || || || Sbjct 18969740 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCAAA 18969681 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 18969680 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 18969622 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||| || || || | ||||| || || || || | ||||| | Sbjct 18969621 TGTCGATGGTGTCAGACGACTCGACCTCAAGGGTGATCGTCTTACCAGTCAAGGTCTTCA 18969562 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 18969561 CGAAGATCTGCAT 18969549 >seq4 Length=23326293 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || || || || || || || ||| | || || |||||||| ||||| || Sbjct 20245627 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAA 20245568 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | || |||||||| ||| || || | ||| Sbjct 20245567 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCA-CGT 20245509 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||| || || || | |||||||| ||||| || || ||||| | Sbjct 20245508 TGTCGATGGTGTCAAACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAA 20245449 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 20245448 CGAAGATCTGCAT 20245436 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| || || ||||| ||||| || | || || |||||||| ||||| || Sbjct 20245398 TCCTTCTGAATGTTATAGTCAGCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 20245339 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | ||| | | ||||||||| ||| || || | | Sbjct 20245338 ATAAGACGCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCATGTTG 20245279 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 20245278 TCAATTGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACG 20245219 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 20245218 AAGATCTGCAT 20245208 >seq1 Length=32922458 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| |||| || |||||| || || ||||| || || || || || | || || Sbjct 9819694 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTC 9819635 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| || || ||||||||||| | || | | |||||||||| Sbjct 9819634 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 9819575 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 ||| || || | ||| | | | ||||| || ||||| || | |||||| || | Sbjct 9819574 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 9819516 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 | ||||| || ||||| || ||||| ||||| ||| Sbjct 9819515 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTC 9819481 >seq8 Length=20165712 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| ||||| ||||| || | || || |||||||| || ||||| Sbjct 3967766 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTACGGCCTTCCTCGAGCTGCTTGCCGGCGAA 3967825 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||| ||||||||||| | || | || |||||||||| Sbjct 3967826 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 3967865 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||||||||| ||||| ||||| || | || || |||||||| || || || Sbjct 3967538 CTCCTTCTGAATATTGTAGTCAGCAAGAGTACGGCCTTCCTCAAGCTGCTTGCCGGCAAA 3967597 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| |||||||| || | || | | ||||| ||| ||| | || | || | Sbjct 3967598 GATGAGACGCTGCTGATCAGGAGGGATCCCTTCCTTATCC-TGAATCTTCGCCTTCACAT 3967656 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||| || || || | ||||| || ||||| || || ||||| | Sbjct 3967657 TGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTCTTGCCGGTGAGGGTCTTGA 3967716 Query 42196 CAAAGATTTGCAT 42208 | ||||| | ||| Sbjct 3967717 CGAAGATCTTCAT 3967729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212718518080