Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 145 9e-30 seq5 143 3e-29 seq2 129 7e-25 seq6 125 8e-24 seq4 107 2e-18 seq8 95.1 1e-14 seq7 87.8 2e-12 seq9 84.2 2e-11 >seq1 Length=32922458 Score = 145 bits (160), Expect = 9e-30 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || ||||| | || || Sbjct 9819694 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTC 9819635 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| ||||||||||| | ||| | | |||||||||| Sbjct 9819634 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 9819575 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | ||||| || ||||| |||| |||||| || | Sbjct 9819574 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 9819516 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 | |||||||| || || || ||||| ||||| || Sbjct 9819515 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9819482 Score = 129 bits (142), Expect = 7e-25 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||||| || ||||| ||||| || Sbjct 18387253 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGCGTGCGGTCGTCCTC 18387194 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACG---CTCTCCTTGTC 46500 ||||||||||||||||| || | |||||||||| |||||| | | |||||||| Sbjct 18387193 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGT---CCGGCATGATTCCTTCCTTGTC 18387137 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | | |||| ||| | || | ||||||||| ||||| |||| ||||||||| Sbjct 18387136 CTGCACCTTCGCCTTCACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGT 18387077 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || ||||| || || || ||||| ||||| || Sbjct 18387076 CTTCCCGGTCAGGGTCTTCACGAAGATCTGCATCTT 18387041 >seq5 Length=20807039 Score = 143 bits (158), Expect = 3e-29 Identities = 176/238 (74%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 46357 ATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATT 46416 |||||| | ||| || | | ||| | |||||||||||| || |||||| ||||| || Sbjct 6507190 ATATTAGTGGCCACCACGGAGACGGAGCACCAGATGCAAGGTGGACTCCTTCTGGATGTT 6507249 Query 46417 GTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTG 46476 ||| || | | ||||| | || || ||||||||||| || ||||| | ||||||||| Sbjct 6507250 GTAATCTGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAATATGAGGCGCTGCTG 6507309 Query 46477 GTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGC 46535 ||| | || | || |||||||||| ||||| ||| | ||| | | | |||||| Sbjct 6507310 GTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTCA-CGTTGTCAATCGTGTCTG 6507368 Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || | ||| ||||||||||| |||| || || |||||||||||||| Sbjct 6507369 ACGACTCAACCTCTAGCGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 6507426 Score = 141 bits (156), Expect = 1e-28 Identities = 153/200 (77%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 2856322 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 2856381 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| |||||| ||| | ||| Sbjct 2856382 GATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 2856440 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| ||||||||| || |||||||| || || | Sbjct 2856441 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 2856500 Query 46581 CAAAGATTTGCATTTTGCAC 46600 | ||||| ||||| ||| || Sbjct 2856501 CGAAGATCTGCATCTTGAAC 2856520 Score = 118 bits (130), Expect = 1e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| | ||||| || | || || ||||||||||||||||| Sbjct 16644158 CTCCTTCTGAATGTTGTAGTCCGCGAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAA 16644099 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| ||||||| ||| | | Sbjct 16644098 GATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 16644039 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | || ||||| ||||| || || || || || Sbjct 16644038 GTCGATCGTGTCTGATGACTCAACCTCGAGTGTAATGGTCTTGCCAGTAAGGGTCTTCAC 16643979 Query 46582 AAAGATTTGCATT 46594 ||||| |||||| Sbjct 16643978 GAAGATCTGCATT 16643966 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || ||||| | || |||||| ||||| |||||||| | Sbjct 16643739 TGCCTCCCCGGAGACGGAGGACAAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAG 16643680 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||||||||| | || ||||||||||||||||| || || | ||||||||||| | | Sbjct 16643679 CAAGAGTGCGCCCATCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGTG 16643620 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | |||||| ||| |||||| ||||| | | | ||||| || || | Sbjct 16643619 GGATTCCCTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAA 16643560 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | || ||||| ||||| || || || || |||||||| ||||| Sbjct 16643559 CCTCGAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 16643511 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || |||||||| | || ||||| |||| ||||||||||||||||| || Sbjct 6507464 TCCTTTTGAATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAG 6507523 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||| | || | || ||||||||| |||||| ||| | | Sbjct 6507524 ATGAGGCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTA 6507583 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| ||| || || || | || ||||| ||||| ||||| || || ||| Sbjct 6507584 TCGATTGTGTCTGACGACTCAACCTCAAGTGTAATGGTCTTGCCTGTCAGGGTCTTGACA 6507643 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 6507644 AAAATCTGCAT 6507654 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || |||||||| || | | || || | || || ||||||||||| ||||| Sbjct 6507692 TCCTTCTGAATATTGTAATCTGCCAACGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAG 6507751 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| || | || | || |||||||||| ||| ||| ||| | ||| Sbjct 6507752 ATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTCA-CGTT 6507810 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || |||| |||||||| || || |||| || || || Sbjct 6507811 GTCGATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 6507870 Query 46582 AAAGATTTGCATT 46594 |||||| |||||| Sbjct 6507871 AAAGATCTGCATT 6507883 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | ||||| | | || |||||||||||||| || || Sbjct 16643930 CTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAA 16643871 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | |||||||||| ||||| ||||| | Sbjct 16643870 GATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCCTTGACATT 16643811 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || || ||||| || | ||||| || ||||| |||| || ||||| Sbjct 16643810 GTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTAAC 16643751 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 16643750 GAAGATTTGCAT 16643739 Score = 82.4 bits (90), Expect = 9e-11 Identities = 142/205 (69%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || ||||| || | || ||||| |||| || || |||||||| || || Sbjct 6507919 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCCGCAAA 6507978 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| ||||| |||| | Sbjct 6507979 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATT 6508038 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || ||||| || || | || ||||| ||||| || || || || || Sbjct 6508039 GTCGATTGTATCAGAGGATTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCAC 6508098 Query 46582 AAAGATTTGCATTTTGCACAAACAA 46606 |||||| |||| | || ||| |||| Sbjct 6508099 AAAGATCTGCA-TCTGTACATACAA 6508122 >seq2 Length=26406337 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||||| || || || | || |||||| ||||| |||||||| | Sbjct 2676790 TGCCTCCCCTGAGACGCAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 2676849 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | |||| || ||||||||||||||||| || | ||||||||||| | | Sbjct 2676850 CGAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGG 2676909 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| | | | |||||| || |||| Sbjct 2676910 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCGGAAGACTCCA 2676969 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 2676970 CCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 2677018 Score = 129 bits (142), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | || || || | || |||||| ||||| |||||||| | Sbjct 2677018 TGCCTCCCCTGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 2677077 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | |||| || |||||||||||||| || || | ||||||||||| | | Sbjct 2677078 CAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGG 2677137 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| |||||| ||||| ||| | | | |||||| || ||| Sbjct 2677138 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCC 2677196 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 2677197 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 2677246 Score = 127 bits (140), Expect = 2e-24 Identities = 148/196 (76%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || || || |||| || |||||||||||||| || Sbjct 2676599 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAA 2676658 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | ||| | | |||||||||| |||||| ||||| ||| Sbjct 2676659 AATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2676717 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| ||||| || | |||||||| ||||| || || || | Sbjct 2676718 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCT 2676774 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||| ||||| Sbjct 2676775 TCACGAAGATCTGCAT 2676790 Score = 107 bits (118), Expect = 2e-18 Identities = 173/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | || || || | || |||||| ||||| |||||||||| Sbjct 2677246 TGCCTCCCCTGAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGG 2677305 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || || ||||||||||| ||||| || | ||||||||||| | | Sbjct 2677306 CAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGG 2677365 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||| ||| |||||| ||||| ||| | | | ||||| || ||| Sbjct 2677366 GGATGCCCTCCTTATCCTGGATCTTAGCCTTGA-CGTTGTCAATGGTGTCAGAGGACTCC 2677424 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAA 46603 || || | ||||| || ||||| |||| || || || ||||| ||||| | | ||| Sbjct 2677425 ACCTCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCACGAAGATCTGCATCTGTAAGAAA 2677484 Query 46604 CAACAC 46609 ||||| Sbjct 2677485 TAACAC 2677490 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || ||||| | || || Sbjct 2676353 CACCAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 2676412 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| ||||||||||| | || | | |||||| ||| Sbjct 2676413 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTATCCTG 2676472 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||| | | | | ||||| |||| || || |||| |||||||| Sbjct 2676473 TATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC---TCAACCTCCAGAGTGATGGT 2676529 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || ||||| ||||| Sbjct 2676530 CTTCCCAGTCAAGGTCTTGACGAAGATCTGCAT 2676562 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| ||||||||||| | || || || | || || || |||||||| || || Sbjct 20340951 TCCTTTTGAATATTGTAGTCAGCGAGTGTTCGGCCATCCTCTAGTTGCTTGCCAGCAAAA 20341010 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||| ||||| | || | || || ||||||| |||||| |||| | Sbjct 20341011 ATCAGCCTCTGTTGGTCTGGGGGGATGCCCT-CTTGTCCTGGATCTTGGCTTTGACATTG 20341069 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || | |||||||| ||||| |||| || |||||| Sbjct 20341070 TCGATGGTGTCGGAAATCTCAACCTCAAGAGTGATGGTCTTGCCGGTCAAAGTCTTAACA 20341129 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 20341130 AAGATCTGCAT 20341140 >seq6 Length=21016138 Score = 125 bits (138), Expect = 8e-24 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | ||| |||||| || || |||||||| | || ||||| |||| || Sbjct 18970213 ACCAGGTGGAGGGTAGACTCCTTCTGNATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCC 18970154 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||| || || | ||||||||||| | || | || |||||||||| | Sbjct 18970153 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 18970094 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||| | ||| | | | |||||| || || || || | ||||||||| || Sbjct 18970093 ATCTT-GGCTTTAACGTTGTCAATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTT 18970035 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||| ||||| Sbjct 18970034 GCCTGTCAGGGTCTTGACGAAGATCTGCAT 18970005 Score = 118 bits (130), Expect = 1e-21 Identities = 150/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| | ||||| | || || ||||||||||| ||||| Sbjct 18969512 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 18969453 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 18969452 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18969393 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| ||||| || || || || || Sbjct 18969392 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 18969333 Query 46582 AAAGATTTGCATTTTGCACAAACAA 46606 |||||| |||| | |||||| |||| Sbjct 18969332 AAAGATCTGCA-TCTGCACACACAA 18969309 Score = 118 bits (130), Expect = 1e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| | |||||||| | || || |||||||||||||| || Sbjct 18969967 TCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 18969908 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | || | | |||||||||| |||||| ||| | ||| Sbjct 18969907 ATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 18969849 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || || | ||||||||| || || ||||| || || || Sbjct 18969848 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTCCCAGTCAGGGTCTTGAC 18969789 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 18969788 GAAGATCTGCAT 18969777 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| ||||| |||||||| | || || || | || || Sbjct 18969758 CACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGTCCATCCTC 18969699 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||| || || | ||||||||||| | || | || |||||||||| Sbjct 18969698 CAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 18969639 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||||| ||| | | | ||||| ||| || || || | ||||| || | Sbjct 18969638 GATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGACGACTCGACCTCAAGGGTGATCGTCT 18969580 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || |||| || || || ||||| ||||| Sbjct 18969579 TACCAGTCAAGGTCTTCACGAAGATCTGCAT 18969549 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| || | || ||||| | || || |||||||| || || || Sbjct 18970423 TCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAG 18970364 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | ||| | || |||||||||| |||||| ||| | | Sbjct 18970363 ATCAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTG 18970304 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || || || |||| |||||||| ||||| || || || || || Sbjct 18970303 TCAATAGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACG 18970244 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 18970243 AAGATCTGCAT 18970233 >seq4 Length=23326293 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||||| || |||||| | || || |||||||| || || || Sbjct 20245627 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAA 20245568 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||| |||||| ||| | ||| Sbjct 20245567 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCA-CGT 20245509 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| ||| || || |||| |||||||| ||||| || || || |||| Sbjct 20245508 TGTCGATGGTGTCAAACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAA 20245449 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 20245448 CGAAGATCTGCAT 20245436 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || || ||||| | | ||||| | || |||||||||||||| || || Sbjct 20244942 TCCTTCTGAATGTTATAGTCCAA--GGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 20244885 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | | |||||||||| | || | || |||||||||| ||||| ||| | | Sbjct 20244884 ATAAGGTGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTG 20244825 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| || || || |||| |||||||| ||||| || || || ||||| Sbjct 20244824 TCAATCGTGTCGGAGGACTCTACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACG 20244765 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 20244764 AAAATCTGCAT 20244754 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| || || || | || ||||| | || || ||||||||||| ||||| Sbjct 20245170 TCTTTCTGGATGTTATAATCAGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAG 20245111 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| || | || | || |||||| ||| |||||| ||| | | Sbjct 20245110 ATGAGGCGCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTG 20245051 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || || || |||| |||||||| ||||| || || || || ||| Sbjct 20245050 TCAATTGTATCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTCACA 20244991 Query 46583 AAGATTTGCATT 46594 ||||| |||||| Sbjct 20244990 AAGATCTGCATT 20244979 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || |||| ||| ||||| || || || ||||| | |||||||| | || || Sbjct 20245416 ACAAGGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCAGCAAGAGTGCGGCCATCCTCC 20245357 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | ||||||||||| | || | | ||||||||| | Sbjct 20245356 AGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGG 20245297 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||||| || || || |||| |||||||| ||| Sbjct 20245296 ATCTTGGCCTTCATGTTGTCAATTGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTG 20245237 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||| ||||| Sbjct 20245236 CCAGTGAGGGTCTTCACGAAGATCTGCAT 20245208 >seq8 Length=20165712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||| || || | || |||||| || || |||||||| | Sbjct 3967729 TGCCTCCACGGAGACGAAGCACAAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAG 3967788 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||||| || | || |||||||||||||||||||| || | |||||||||||| | | Sbjct 3967789 CAAGAGTACGGCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 3967848 Query 46485 GCACGCTCTCCTTGTCCATGATCTT 46509 | | || |||||||||| ||||| Sbjct 3967849 GAATGCCCTCCTTGTCCTGAATCTT 3967873 >seq7 Length=22540073 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || |||||||| |||||| ||||| |||||||| | || || || ||||||| Sbjct 12970866 ACGAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGCGTACGGCCGTCGTCC 12970925 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| |||||||| |||| ||||||||||| | ||| Sbjct 12970926 AGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 12970966 >seq9 Length=15534364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| || || | || |||||| ||||| |||||||||| || |||||| || Sbjct 11743524 CGCAGCACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGCCCG 11743465 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||||| |||||||| || ||||| || | ||||||||||| Sbjct 11743464 TCGTCAAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGGTC 11743424 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| || ||||||||||||||||| Sbjct 15313787 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 15313728 Query 46462 TATCAAGCGCTGCTGGTC 46479 || | ||||||||||| Sbjct 15313727 GATTAGCCGCTGCTGGTC 15313710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238315214240