Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq9 100 9e-17 >seq9 Length=15534364 Score = 100 bits (110), Expect = 9e-17 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 5303 TCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCC 5362 ||||| || || || ||||| || || ||||| || || ||||||||||| || || Sbjct 12953940 TCAACTACAGATTGGTTGAAATTGAATCCGTTTAGGTTGAAAGCCATAGTACTAATACCT 12953881 Query 5363 ATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGG 5422 | || || | ||| || | || || ||||||| ||||| |||||| |||||| ||| Sbjct 12953880 AAAGCAGTGAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGA 12953821 Query 5423 CTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAA 5462 |||||||| |||||||| |||||||| | || |||| Sbjct 12953820 GAGTTGTTAAAACTAGCATATTGGAAGATTAATCGGCCAA 12953781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152649578247432