Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 122 4e-23 >seq2 Length=26406337 Score = 122 bits (134), Expect = 4e-23 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 |||||||||| || |||||||||||||| || || | ||||| ||||||||||| || Sbjct 25078567 TACCTTTTCTCTTGCCTCCACCTTGATCAACATAACGAGCAGTATCATTGAAAACACGCA 25078508 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 ||| ||||| | |||| | || ||| ||||| | |||| | || || | || Sbjct 25078507 GCATGGGAACAATTCCATTAGATGTTCCATTTGTTCCTCGAATGTAACTCCCAGTTGCTC 25078448 Query 26184 TAATATCGTGAGCATGA-ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCT 26242 |||||| |||| ||| | ||| ||||||||||| ||||| || | ||||| || Sbjct 25078447 TAATATTGTGAAT-TGAGACACCAATTCCACCAGCACATTTGCTTATGGTAGCACATTCC 25078389 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 || | ||||| ||||||| | ||||||||| ||||||| Sbjct 25078388 GAGAGAGTATCATAAATTCCCTCGATGCTATCATCTTTCAT 25078348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039962992900