Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-11 >seq5 Length=20807039 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 171878 CTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAA 171937 |||||| ||| || ||||||| | | || |||| || | ||| || || ||||| Sbjct 6507919 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCCGCAAA 6507978 Query 171938 AATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997 || | | ||| ||||||||||| || || || || || || || || ||| ||||| Sbjct 6507979 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATT 6508038 Query 171998 AGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057 || ||||| || ||||| || || || || ||||| || ||||| | ||| || | Sbjct 6508039 GTCGATTGTATCAGAGGATTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCAC 6508098 Query 172058 GAATATCTGCAT 172069 || |||||||| Sbjct 6508099 AAAGATCTGCAT 6508110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135864229600