Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 seq6 114 1e-20 seq1 109 5e-19 seq5 100 3e-16 seq4 100 3e-16 >seq2 Length=26406337 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || || || || || | || Sbjct 20340457 ATGCAGATCTTTGTGAAGACTCTTACCGGCAAGACCATAACTCTGGAGGTGGAGAGCTCC 20340398 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || || | ||| ||||| ||||| ||||| || || || || || || || Sbjct 20340397 GACACAATTGACAATGTTAAGGCAAAA-ATCCAGGACAAGGAGGGCATCCCGCCTGACCA 20340339 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| ||||| ||||||||||| | | | || | ||||| || Sbjct 20340338 GCAGAGGCTCATCTTTGCTGGGAAGCAGCTGGAGGACGGGCGCACATTGGCTGATTACAA 20340279 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || |||||||| | || | || ||||| Sbjct 20340278 TATTCAGAAGGAATCCACCCTTCACTTGGTCCTCCGCCTTCGTGGAGG 20340231 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || ||||| || || | || Sbjct 2677246 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 2677187 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 2677186 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 2677127 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||||||||| || | | | | || || ||| Sbjct 2677126 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCAGGACCCTTGCTGACTACAAC 2677067 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| ||||| || ||| Sbjct 2677066 ATCCAGAAGGAGTCGACCCTCCAC 2677043 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | || || || || || || ||||| || || || ||||| | | Sbjct 20340686 GATGCAAATCTTTGTGAAGACCCTTACAGGAAAGACTATCACTCTTGAGGTAGAGAGCTC 20340627 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || | || || |||||||| ||||| || || || |||| ||||| Sbjct 20340626 TGATACAATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCTCTCCTGATCA 20340567 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | || ||||| |||||||||||||| || | | | || | ||||| || Sbjct 20340566 GCAGAGGCTAATATTTGCTGGGAAACAGCTGGAAGACGGGCGCACATTGGCTGATTACAA 20340507 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||| ||||| || || || |||||||| Sbjct 20340506 CATTCAGAAGGAGTCTACTCTTCACTTGGT 20340477 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || | || ||||| || || ||||| || | Sbjct 20340230 GATGCAGATCTTTGTCAAGACCCTGACTAGAAAGACTATCACACTTGAAGTCGAGAGTTC 20340171 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 20340170 AGATACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCA 20340111 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | | |||||||| ||||| || ||||||||| | | | | | |||| || || Sbjct 20340110 ACAAAGGCTCATCTTTGCTGGGAAGCAACTGGAGGATGGGCGTACCTTAGCAGACTACAA 20340051 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| ||||||||||| || || || |||| Sbjct 20340050 CATCCAAAAGGAATCCACCCTTCATCTTG 20340022 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || | || Sbjct 2677018 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTCC 2676959 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 2676958 GACACTATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 2676899 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||||||||| || | | | | || || ||| Sbjct 2676898 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCAGGACCCTCGCTGACTACAAC 2676839 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | || |||| | | |||||| Sbjct 2676838 ATCCAGAAGGAGTCGACCCTCCACCTTGTCCTGCGTCTCAGGGGAGGC 2676791 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || ||| | | Sbjct 20340914 GATGCAGATCTTTGTGAAGACCCTTACAGGAAAGACGATCACACTTGAGGTTGAAAGCTC 20340855 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || | || || |||||||| ||||| || || || ||||| ||||| Sbjct 20340854 TGATACAATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCA 20340795 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| || || ||||| || ||| | | || | || || || Sbjct 20340794 GCAGAGGCTCATCTTTGCTGGAAAGCAGCTTGAAGATGGACGCACGTTGGCTGACTACAA 20340735 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || || ||||| |||| | || ||||| Sbjct 20340734 CATCCAGAAGGAGTCTACTCTTCATTTGGTTCTGCGTCTCCGTGGAGG 20340687 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||| || | ||||| || || || || || || || || | Sbjct 20341141 GATGCAGATCTTTGTTAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGATTTC 20341082 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||||| ||||| || || || || || || || Sbjct 20341081 CGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAA-GAGGGCATCCCCCCAGACCA 20341023 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| ||||| || || || || |||||| ||| | | || || || Sbjct 20341022 ACAGAGGCTGATTTTTGCTGGCAAGCAACTAGAGGATGGCCGAACACTCGCTGACTACAA 20340963 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||| || || ||| | || | || ||| | || || Sbjct 20340962 TATTCAAAAGGAATCCACCCTCCACCTTGTACTTCGCTTGAGGGGTGG 20340915 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | ||||| || ||||| || || || || || || | Sbjct 2677475 GATGCAGATCTTCGTGAAGACATTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCCTC 2677416 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || || || || || || || || Sbjct 2677415 TGACACCATTGACAACGTCAAGGCTAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCA 2677356 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || |||||||||||| || | | | | || || || Sbjct 2677355 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCCGACTACAA 2677296 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || ||||| || || || ||| Sbjct 2677295 CATCCAGAAGGAGTCAACCCTCCAC 2677271 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || || | || Sbjct 2676562 ATGCAGATCTTCGTCAAGACCTTGACTGGGAAGACCATCACTCTGGAGGTTGAGAGCTCC 2676503 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || || || || || Sbjct 2676502 GACACCATTGATAATGTGAAGGCCAAGATACAGGATAAGGAGGGGATTCCCCCGGACCAG 2676443 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||||||| | | | | | || || ||| Sbjct 2676442 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCCGACTACAAC 2676383 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||| ||||| Sbjct 2676382 ATCCAGAAGGAGTCAACCCTTCACCTGGTG 2676353 >seq6 Length=21016138 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || || || || || || | Sbjct 18970232 GATGCAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTC 18970291 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 18970292 TGACACTATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCA 18970351 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||||||||| || || |||||||||||| | | | | | ||||| || Sbjct 18970352 GCAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTTGCGGATTACAA 18970411 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || |||||||| || || ||||||||| Sbjct 18970412 CATCCAGAAGGAATCCACCCTCCACTTGGTG 18970442 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || |||||||| || || || | Sbjct 18969777 ATGCAGATCTTCGTCAAGACCCTGACTGGGAAGACCATCACGCTCGAGGTCGAGTCCTCG 18969836 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || || || || Sbjct 18969837 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 18969896 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||||||||| || |||||||||||| | | | | || || ||| Sbjct 18969897 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTGCTGACTACAAC 18969956 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || |||||||| || || ||| ||||| Sbjct 18969957 ATCCAGAAGGAATCCACCCTCCACCTGGTG 18969986 Score = 105 bits (116), Expect = 6e-18 Identities = 166/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGA--AGTAGAAG-- 24758 ||||||||| ||| | || || || ||||| ||||| || || || || ||| || | Sbjct 18552964 GATGCAGATTTTTGTGAAGACTCTCACCGGGAAAACCATCACCCTTGAGGAGTTGAGGTT 18552905 Query 24759 ----CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 || | || ||| | || | || || |||||||| ||||| ||||| || || Sbjct 18552904 GAGTCCTCAGATACAATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCA 18552845 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 | ||||| || |||||||||||||| | || ||||| |||||| | | | | || Sbjct 18552844 CTGGATCAGCAGCGTTTGATCTTTGCTCGAAAGCAGCTTGAGGATGGTCGCACCCTTGCA 18552785 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||||||||| || ||||| || || |||||| | ||| | || | || || ||| Sbjct 18552784 GATTATAACATCCAGAAGGAGTCCACCCTACACCTCGTGCTCCGCCTCCGTGGTGGC 18552728 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||||| || || || || | Sbjct 18970005 ATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACGCTTGAGGTCGAGTCCTCG 18970064 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | |||||||| ||||| || || || || || || || Sbjct 18970065 GACACGATTGACAACGTTAAAGC-CAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 18970123 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||||||||| || ||||||||||| | | | | | || || || Sbjct 18970124 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTTGCTGACTACAA 18970183 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 18970184 CATNCAGAAGGAGTCTACCCTCCACCTGGT 18970213 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || | | Sbjct 18969549 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACGATCACCCTTGAGGTCGAGTCGTCT 18969608 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 18969609 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 18969668 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || |||||||||||| | | | || | || || ||| Sbjct 18969669 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGACGTACCCTGGCTGACTACAAC 18969728 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||| ||||| Sbjct 18969729 ATCCAGAAGGAGTCTACTCTCCACCTGGTG 18969758 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || ||||| || || || | Sbjct 18969320 GATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTC 18969379 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 18969380 GGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 18969439 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || ||||| |||||| | | | || | || || || Sbjct 18969440 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCTTGGCCGACTACAA 18969499 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| || || || ||| | ||| Sbjct 18969500 CATCCAGAAGGAGTCCACCCTCCACCTCGTG 18969530 >seq1 Length=32922458 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || ||||| || || || || | Sbjct 9819484 GATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCCTC 9819543 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 9819544 GGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCA 9819603 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | | | || || || Sbjct 9819604 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTCGCCGACTACAA 9819663 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| ||||| || ||| ||||| | || | ||||| |||| Sbjct 9819664 CATCCAGAAGGAGTCGACCCTGCACCTGGTGCTCCGCCTCCGCGGCGGCG 9819713 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || ||||| || || || || Sbjct 18387043 GATGCAGATCTTCGTGAAGACCCTGACCGGGAAGACCATCACGCTGGAGGTGGAGAGCAG 18387102 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | | | || || ||| | || ||||| |||||||| || || || Sbjct 18387103 CGACACGATCCAGAACGTGAAGGCGAAGGTGCAGGACAAGGAAGGAATCATGCCGGACCA 18387162 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGA--GAAACATGTCAGATTAT 24880 || || | ||||| ||||| || ||||||||||| ||| | | | | || || Sbjct 18387163 GCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGA--CGACCGCACGCTTGCCGACTAC 18387220 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||| ||||| || ||| | ||| | || | ||||| ||| Sbjct 18387221 AACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTCCGCGGCGGC 18387271 >seq5 Length=20807039 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || || || ||||| || || || || | | Sbjct 6507654 ATGCAGATTTTTGTCAAGACCCTGACAGGCAAGACCATTACACTTGAGGTTGAGTCGTCA 6507595 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| ||||| || || || || || Sbjct 6507594 GACACAATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAAGGCATTCCACCAGACCAG 6507535 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||||||||| || ||||| ||||| | | | | | || || ||| Sbjct 6507534 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGACGCACCCTTGCTGACTACAAC 6507475 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||||||||| || || ||| ||||| Sbjct 6507474 ATTCAAAAGGAATCCACTCTCCACCTGGTG 6507445 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| ||||| || || | | Sbjct 16643967 ATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACCATTACACTCGAGGTTGAGTCATCA 16644026 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 16644027 GACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 16644086 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || |||||||||||| | | | | || || ||| Sbjct 16644087 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTCGCGGACTACAAC 16644146 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| || || || ||||||||| Sbjct 16644147 ATTCAGAAGGAGTCCACCCTCCACTTGGTG 16644176 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | || || | ||||| ||||| |||||||| || || || | | Sbjct 6507427 GATGCAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACGCTAGAGGTTGAGTCGTC 6507368 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||| || ||||| || || || || || || || Sbjct 6507367 AGACACGATTGACAACGTGAAGGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 6507308 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | || ||||| || || |||||||||||| | | | || ||||||| || Sbjct 6507307 GCAGCGCCTCATATTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCAGATTACAA 6507248 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || | || ||||| | || | || || ||| Sbjct 6507247 CATCCAGAAGGAGTCCACCTTGCATCTGGTGCTCCGTCTCCGTGGTGGC 6507199 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || || || || || || || || | Sbjct 6507882 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTGGAGGTCGAGTCCTCG 6507823 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||| ||||| || || || || || ||||| Sbjct 6507822 GACACGATCGACAACGTGAAGGCGAAA-ATCCAGGACAAGGAGGGCATTCCCCCTGATCA 6507764 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || ||||| |||||| | | || ||||||| || Sbjct 6507763 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGGACGTTGGCAGATTACAA 6507704 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||||| || || ||| Sbjct 6507703 TATTCAGAAGGAATCCACTCTTCAC 6507679 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || ||||| || || || | Sbjct 16643510 GATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTCGAGGTTGAGTCCTC 16643569 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || || ||||| || || || || Sbjct 16643570 GGACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCA 16643629 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||||||||| || ||||| || ||| | | | | | || || || Sbjct 16643630 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGCACTCTTGCTGACTACAA 16643689 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| || ||||| || || || || |||| Sbjct 16643690 CATCCAGAAGGAGTCCACGCTTCATCTTG 16643718 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || ||| || | Sbjct 6508111 GATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTTGAGGTTGAATCCTC 6508052 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || | || ||| ||||| || ||||| || || || || || || || Sbjct 6508051 TGATACAATCGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCA 6507992 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | |||||||| || || || || ||||| | | | | ||||||| || Sbjct 6507991 GCAGCGCCTCATCTTTGCGGGCAAGCAACTTGAGGACGGCCGCACCCTCGCAGATTACAA 6507932 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 |||||| || || || || || ||| Sbjct 6507931 CATTCAGAAAGAGTCCACCCTCCAC 6507907 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || ||||| || || || || | Sbjct 2856514 GATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTC 2856455 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 2856454 GGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCGGACCA 2856395 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | ||||| ||||| || ||||| ||||| | | | | | || || || Sbjct 2856394 GCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 2856335 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| || || || ||| | ||| | || | || || |||| Sbjct 2856334 CATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTCCGTGGCGGCG 2856285 >seq4 Length=23326293 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || || || | || || || | Sbjct 20245436 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTTT 20245495 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 20245496 GACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCAGACCAG 20245555 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| ||||| |||||||||||| | | | | | | || |||||| Sbjct 20245556 CAGCGTCTCATCTTTGCTGGGAAGCAGCTGGAGGATGGGCGCACCCTTGCCGACTATAAC 20245615 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 20245616 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCG 20245650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | || || || || | Sbjct 20245208 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCT 20245267 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | | || |||||||| ||||| ||||| || || || || || Sbjct 20245268 GACACAATTGACAACATGAAGGCCAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAG 20245327 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || |||||||||||| | | | | || |||||| Sbjct 20245328 CAGCGTCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTTGCTGACTATAAC 20245387 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || ||| | || | || | || ||||| Sbjct 20245388 ATTCAGAAGGAATCTACTCTGCACCTTGTCCTCCGCCTTCGTGGAGG 20245434 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || |||| || || || || || || || || | || ||||| || | Sbjct 20244753 GATGCAGATTTTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTAGAGTCCTC 20244812 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| || ||||| || || || ||||| || || Sbjct 20244813 CGACACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCA 20244872 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| || || ||||| |||||| | | | | || ||||| Sbjct 20244873 GCAGCACCTTATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTG--GACTATAA 20244930 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||| |||||||| || || ||| | || |||| Sbjct 20244931 CATTCAGAAGGAATCCACCCTGCACCTTGTCCTGCG 20244966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897532515360