Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21]
12 sequences; 266,687,832 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq7 232 1e-54
seq6 212 1e-48
seq1 188 1e-41
seq8 179 6e-39
seq5 179 6e-39
seq3 174 2e-37
seq2 174 2e-37
>seq7
Length=22540073
Score = 232 bits (256), Expect = 1e-54
Identities = 245/323 (76%), Gaps = 6/323 (2%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| ||| ||||||||||| || ||||||
Sbjct 17337716 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCGGGCATGAGTCCACGCTTC 17337657
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| ||||||||| ||||| ||||||||| ||| ||
Sbjct 17337656 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAC 17337597
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
|||||||||||||||| || || ||| || |||||| |||||||||
Sbjct 17337596 GCGACGAGCCGCTCGGCGAAGCGCTCGCCGCCGTC------GATCCAGCGCATCGCCCAG 17337543
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | || | || || ||| |||||||||| |||||| |||||||||||
Sbjct 17337542 TCGGCCTTGCGGCGGACGGCCGGGACGGTGACGATGGCGCGGAAGAGGCGGTCCTTCTCG 17337483
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||| || |||||| |||| || |||||||| |||| ||||||||||| |||
Sbjct 17337482 ACGTCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCG 17337423
Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663
||||||||||||||||| || ||
Sbjct 17337422 ATGGCGATCTGGAAGCCGTAGAA 17337400
Score = 152 bits (168), Expect = 8e-31
Identities = 205/284 (72%), Gaps = 5/284 (2%)
Strand=Plus/Minus
Query 796146 CCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGAT 796205
||| ||||||| || || || || |||||| | | || |||||||| |||||
Sbjct 17337396 CCTCGCCTCGGCGACCTGCACGTCGGACATGAACCTGGACGCGAGGTTCTCGAGGACGAT 17337337
Query 796206 GCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCT 796265
||||||| ||||||||| |||||||| ||||| | |||||||||||||| |
Sbjct 17337336 GCCGTCGGAGGCGGCGAAGAAGGCGAGCACGTGGGACACGAAGTGACGCTCGTCCGGGGA 17337277
Query 796266 GAGCGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAA 796322
||| ||| |||||||| || |||| || ||||||||||||||| || ||||| ||
Sbjct 17337276 GAGGGAGGTGTCCCAGTGGCGCGCGTCGCCGGAGAGGTCGACCTCCTCCGCCGTCCAGAA 17337217
Query 796323 GGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAAC 796382
|| ||| | ||||| ||||| | |||||| ||| | || | ||||| |||||||
Sbjct 17337216 CGACGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGAAACGGATCGGGAACATGGA 17337157
Query 796383 AAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG--CATGACGC 796424
||||| | || | ||| |||||||||||| |||| |||
Sbjct 17337156 GAAGCGGTCGGAGGACTCCGCCAGCAGCGGCTCGTCCATGTCGC 17337113
Score = 138 bits (152), Expect = 2e-26
Identities = 175/241 (73%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||| |||||| || || || |||||| |||||| |||||||||||||||| |
Sbjct 17338039 TGACGGACGCCTTCTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCA 17337980
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| | ||||||||| ||| ||||| | ||| ||||| ||| || |
Sbjct 17337979 GGGAGATGAGCTCCATCCAGTCGAAGGGGTTAACAACATTGTACATCTTCTTGCAGCCCA 17337920
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
||| | |||| ||| || ||||| || || |||||||||| ||| || | ||||||
Sbjct 17337919 GCGCCATGAGCAAGCGATCAGCGACAAACTCGATGTACTGGCTCATCAGCTCCCCGTTCA 17337860
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | |||||| ||||| || | |||| ||| ||||| ||||||| || ||||| |
Sbjct 17337859 TCCCAACGAGCGCGACGGGGAGTGCGTCGCAGACGAACTCCCTCTCGATGTCAACGGCAT 17337800
Query 794131 C 794131
|
Sbjct 17337799 C 17337799
Score = 98.7 bits (108), Expect = 2e-14
Identities = 177/254 (70%), Gaps = 15/254 (6%)
Strand=Plus/Minus
Query 1249554 TCCGATCGGCGGCCACGGGCGTCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACC 1249613
|| ||||| || ||||| ||||||| ||||||| || | ||||| || ||||||
Sbjct 4131748 TCAGATCGCCG---ACGGGA-TCGCCTACCTGCACGGGCACTCGCCGCCGATCATCCACC 4131693
Query 1249614 GCGATCTCAAGAGCAGCAACCTGCTGGTCGACG---ACGAGTACAATGTCAAGGTGGCCG 1249670
| || ||||| || |||| || | ||| ||| || | | | |||||| | | ||
Sbjct 4131692 GGGACATCAAGTGCGACAACGTGTTCGTCAACGGGAACCACGGCGAGGTCAAGATCGGCG 4131633
Query 1249671 ACTTTGGTCTCGCGCGCATCCGCGAGGACAATGCCACCATGACGCGGTG----CGGCACG 1249726
|| | || ||||| | ||||| | ||| ||| | | |||| | ||| |||
Sbjct 4131632 ACCTCGGCCTCGCCGCCTTCCGCCGTGTCAACGCCGGCG-GCGGCGGCGTCGTCGGGACG 4131574
Query 1249727 CCGGCGTGGACGGCGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTC 1249786
|||| || | |||||| ||||| | |||||| |||||||||||| ||||||||||
Sbjct 4131573 CCGGAGTTCATGGCGCCGGAGGTGTAC---GGCGAGTGCTACGACGAGCTCGCCGACGTC 4131517
Query 1249787 TACTCGATCGGCAT 1249800
||||| |||||||
Sbjct 4131516 TACTCCTTCGGCAT 4131503
Score = 96.9 bits (106), Expect = 5e-14
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 1761220 CGTCCGGCTCACCCCTGGCTCAAGCGAGGTCTCTTTTTCGCCCATCGCGGCCTTGACGAC 1761279
|| ||| | |||| || ||| || || |||| |||||||| |||| ||| || ||
Sbjct 11611483 CGACCGTCGCACCGCTTCCTCCGCCGCGGCATCTTCTTCGCCCACCGCGACCTCCACAAC 11611542
Query 1761280 CTCTTGGACGCCGTCGAGGCCGGCCAGCCGTTCTACCTCTACACGCGCAGGGGTCCCTCG 1761339
|| | ||| | ||| | || || |||||||| |||||| | ||||| ||||||
Sbjct 11611543 CTACTCGACCTCTACGAATCAGGGCAAAAATTCTACCTTTACACGGGGAGGGGGCCCTCG 11611602
Query 1761340 TCCGAGTCGCTCCACCTCGGCCACATGATTCCGTTTCTCTTTTGCCGCTACCTCCAGGAG 1761399
|| |||||||| |||||||||||| | || || || | || || || |||||
Sbjct 11611603 TCGGAGTCGCTTCACCTCGGCCACCTCATCCCCTTCATGTTCACAAAATATCTGCAGGAC 11611662
Query 1761400 GCCTTTGGCGTGCCTTTGGTCGTACAGATGGCCGACGACGCCAAGTTTCTGTACAAGG 1761457
|| || ||||| | || |||||| | ||||||||| ||||| ||| ||||
Sbjct 11611663 GCGTTCAAGGTGCCACTCGTGGTACAGCTCACCGACGACGAGAAGTTCTTGTGGAAGG 11611720
Score = 86.0 bits (94), Expect = 1e-10
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 2035627 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGG 2035686
||||||| | | | |||| |||||||||| |||| ||||| || ||||||||| |
Sbjct 19444142 CCCTCTTCGCGGTCATCCATGCCGCCAACTTCCTCAACATCCAGGGCCTCCTCGACATCA 19444083
Query 2035687 GGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCT 2035746
||| || ||| ||| || |||||||||||| | |||||||| |||||| | |||
Sbjct 19444082 CCTGCCAGTGCGTCGCCGACACGATCAAGGGCAAGACCCCCGAGGAGATCCGCGTGGCCT 19444023
Query 2035747 TTAACATCAAGTACG 2035761
| ||||| || |||
Sbjct 19444022 TCGACATCGAGAACG 19444008
>seq6
Length=21016138
Score = 212 bits (234), Expect = 1e-48
Identities = 241/324 (74%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| |||||||| ||| | |||||| || ||| || ||||||||||| |||||
Sbjct 6618082 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGTCCCGGCATGAGGCCACGCTT 6618141
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|| ||||| |||||||| ||||| ||||||||| || || ||||||||| ||| ||
Sbjct 6618142 TTTCAGCCAGAAGATGGCGCAGAACGAGCCCGAGAAGAAAATCCCCTCGACGCAGGCGAA 6618201
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| ||||| |||||||| || || ||| || |||||| ||| |||||
Sbjct 6618202 TGCCACGAGGCGCTCGGCGAAGCGCTCGCCGCCGTC------GATCCATCGCATGGCCCA 6618255
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579
|| ||||| | || | ||| || |||||||||||||| |||||| ||||||||||
Sbjct 6618256 ATCGGCCTTGCGGCGGACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTC 6618315
Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639
||| ||| || |||||| |||| || |||||||| |||| ||||||||||| ||
Sbjct 6618316 GACGTCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTC 6618375
Query 794640 GATGGCGATCTGGAAGCCATAAAA 794663
|||||||||||||||||| || ||
Sbjct 6618376 GATGGCGATCTGGAAGCCGTAGAA 6618399
Score = 203 bits (224), Expect = 5e-46
Identities = 238/314 (76%), Gaps = 12/314 (4%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| ||| || |||||||||||||||| || ||||| | |||||||
Sbjct 6617777 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTCCATC 6617836
Query 793968 CACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025
|| |||||||||||| ||| ||| ||||| ||| ||||||| | |||| ||
Sbjct 6617837 CAGTCGAACGGGTTGGCGACGT--TGTACATCTTCTTGCAGCCGAGCGCCATGAGCAAGC 6617894
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
||||||||||||| || |||||||||| ||||||| || |||||||||||| |||||| |
Sbjct 6617895 GGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGCGCGA 6617954
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145
|||| |||| |||| ||| ||||| ||||||| |||||||| ||| || ||||| |
Sbjct 6617955 CGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGTCGGCGACGATCT-CG 6618013
Query 794146 TGGGCACGTCGGACGACG-GCTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAG 794201
|| | || | || ||||| | || ||| ||| ||||| |||||||| |||
Sbjct 6618014 CGGACGCGAGCCTCATCGAGCTTGCCCTGGAGGAG-ATC--ATAGAGGAGGCAGGCGAAG 6618070
Query 794202 TCGCAATGCAGACC 794215
||||| || |||||
Sbjct 6618071 TCGCAGTGGAGACC 6618084
Score = 143 bits (158), Expect = 4e-28
Identities = 175/238 (74%), Gaps = 7/238 (3%)
Strand=Plus/Plus
Query 796146 CCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGAT 796205
||| ||||||| || || || || |||||| | | || |||||||| ||||||
Sbjct 6618403 CCTCGCCTCGGCGACCTGCACGTCGGACATGAACCTGGACGCGAGGTTCTCGAGCACGAT 6618462
Query 796206 GCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCT 796265
|||||| || ||||| |||||||| ||||| ||| ||||| ||||||| | | |
Sbjct 6618463 TCCGTCGGACGCCGCGAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTTG--GGT 6618520
Query 796266 GAG-----CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAA 796320
|| || | |||||||| || |||| || ||||||||||||||| || |||||
Sbjct 6618521 GAAAGCGTCGTGTCCCAGTGGCGCGCGTCGCCGGAGAGGTCGACCTCCTCCGCCGTCCAG 6618580
Query 796321 AAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
|| || ||| | ||||| ||||| | |||||| ||| | |||| |||||||||||||
Sbjct 6618581 AACGACGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGTACCGGATGGGGAACA 6618638
>seq1
Length=32922458
Score = 188 bits (208), Expect = 1e-41
Identities = 185/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 2204327 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 2204386
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 2204387 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2204446
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 2204447 GAGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2204506
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| |||||||| |||||||||
Sbjct 2204507 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTCAGCACCTTG 2204565
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||||||||| || ||||| |||||||||||| |||| || |||||| | |
Sbjct 2216241 TGAACTTGGTGACGGCCTTAGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 2216182
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 2216181 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2216122
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 2216121 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2216062
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||| ||||| |||||||| |||||||||
Sbjct 2216061 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGGACCTGCTTCAGCACCTTG 2216003
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 2233751 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 2233810
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| || |||||| ||
Sbjct 2233811 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTCGGCTTCTTGTTGTAGC 2233870
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||| | ||| |||| |||||||||| || |||||||
Sbjct 2233871 GGGCGAGCTTGGCGGCCTCTCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2233930
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| |||||||| | |||||||||||||||||| |||||||||
Sbjct 2233931 TGATGGACATGGCCTTGGACGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTG 2233989
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| || ||||||||| |||| || |||||| | |
Sbjct 2241008 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAAACGGCGTGCTTGGCGAGCTCGCCGGGGA 2241067
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 2241068 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2241127
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 2241128 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2241187
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| |||||||| || ||||||
Sbjct 2241188 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTCAGAACCTTG 2241246
Score = 161 bits (178), Expect = 2e-33
Identities = 179/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| ||||| ||| | |
Sbjct 26615301 TGAACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGTTCACCGGGGA 26615360
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || || |||| |||||||||||| | || | ||| ||| |||||| |
Sbjct 26615361 GGACAAGCCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACC 26615420
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| || | |||||| | ||| |||| |||||||||| ||||||||||
Sbjct 26615421 TAGCGAGCTTTGCAGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAACGAGTTCA 26615480
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| |||||| || | |||||||||||| |||||||||||||||
Sbjct 26615481 TGATGGACATGGCCTTGGAGGAGATCCCGATGTCGGGGTGCACTTGCTTGAGCACCTTG 26615539
Score = 141 bits (156), Expect = 1e-27
Identities = 177/241 (73%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||| |||||||||||| || ||||| ||||||||||| ||| || | |||| | |
Sbjct 2257991 TGAACTAGGTGACGGCCTTAGTGCCCTCAAAGACGGCGTGCTTGGTGAGCTTGCCGGGGA 2257932
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
|| || || |||| ||||| ||||| ||||| | ||| ||| |||||| |||
Sbjct 2257931 GGACGAGACGGACGGAGGTCTAGATCTTGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGT 2257872
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| || | ||| ||| | ||| |||| |||||||||| || |||||
Sbjct 2257871 GGGCG--AGCATGGCGGTCTCTCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTT 2257814
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||| | ||| ||||||||| | ||||||||| |||||||| ||||||||
Sbjct 2257813 CATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTCAGCACCTT 2257754
Query 1485708 G 1485708
|
Sbjct 2257753 G 2257753
>seq8
Length=20165712
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 16613616 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCACCGGGGA 16613557
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| | || | ||| ||| |||||| |
Sbjct 16613556 GGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACC 16613497
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||| || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 16613496 TCGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 16613437
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||||| ||| |||||| || | ||||||||||||||||||||||||||||
Sbjct 16613436 TGATGGACATCGCCTTGGAGGAGATCCCGATGTCGGGGTGCACCTGCTTGAGCACCTTG 16613378
>seq5
Length=20807039
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||| |||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 14614866 TGAACTTCGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 14614807
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||| |||| ||||||||||||||||| | ||| ||| |||||| |
Sbjct 14614806 GAACAAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 14614747
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| || | |||||||| | ||| |||| |||||||||| ||||||||||
Sbjct 14614746 TGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAACGAGTTCA 14614687
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||||||||| | ||| |||||| || | ||||||||| ||||||||||||||||||
Sbjct 14614686 TGATCGACATGGCCTTGGAGGAGATCCCGATGTCGGGGTGAACCTGCTTGAGCACCTTG 14614628
>seq3
Length=29602667
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 8253075 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 8253016
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 8253015 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 8252956
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||| ||| |||| |||||||||| || |||||||
Sbjct 8252955 GGGCGAGCTTGGAGGCCTCGCCTGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 8252896
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| |||||||| | ||| |||||||||||||| |||||||||
Sbjct 8252895 TGATGGACATGGCCTTGGATGAGATGCCGATGTCCGGGTGCACCTGCTTCAGCACCTTG 8252837
Score = 93.3 bits (102), Expect = 7e-13
Identities = 99/130 (76%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 1249563 CGGCCACGGGCGTCGCCTATCTGCACGCGCTCG---ACCCGCCCGTCGTCCACCGCGATC 1249619
|||||| || |||||| || |||||| || | |||||||| || |||||| ||
Sbjct 5901011 CGGCCAGGGCCGTCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGTGACA 5901070
Query 1249620 TCAAGAGCAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTC 1249679
||||| ||||||| | || ||||| |||||||||| |||||||||||||||||| |
Sbjct 5901071 TCAAGTCCAGCAACATACTCCTCGACCACGAGTACAACTCCAAGGTGGCCGACTTTGGAC 5901130
Query 1249680 TCGCGCGCAT 1249689
| |||| ||
Sbjct 5901131 TGTCGCGGAT 5901140
>seq2
Length=26406337
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| ||||||||||| |||| || |||||| | |
Sbjct 23689191 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGTTTGGCGAGCTCGCCGGGGA 23689132
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| || | ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 23689131 GGACGAGGCGGACAGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 23689072
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 23689071 GAGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 23689012
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| |||||||| | ||||||||| |||||||| |||||||||
Sbjct 23689011 TGATGGACATGGCCTTGGACGAGATGCCGATGTCGGGGTGAACCTGCTTCAGCACCTTG 23688953
Score = 86.0 bits (94), Expect = 1e-10
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| || ||||||||| |||||||| | || ||| || ||| |||| ||||| ||
Sbjct 51008 GCTGCGAACTACCTCAACATCAAGGGATTGCTGGATCTGACTTGCCAGACTGTGGCTGAC 50949
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||| ||| | || ||||| ||||||||||| || ||||||||| |||
Sbjct 50948 ATGATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACTTTCAACATCAAGAACG 50894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245123505268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |