Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 7e-13 >seq3 Length=29602667 Score = 89.7 bits (98), Expect = 7e-13 Identities = 136/189 (72%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 201625 || |||||| ||||||||||||| ||| || | || |||| || ||||||||| ||| Sbjct 20039733 CGCATACCACAAATTGGAGATAAGTTTAGTAGTAGGCATGG-TCAGAAAGGAACTGTTGG 20039791 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCG--GGTATGACCCCGGATATT 201683 |||| |||| ||||||| || ||||| | || || | || || || ||||||||| Sbjct 20039792 AATGACTTATACACAAGAGGACATGCC--ATGGACTATTGAAGGCATCACACCGGATATT 20039849 Query 201684 ATAATCAATCCAAATTGTATACCATCAAGAATGACCATAAATCAAATAATTGCAACTGTT 201743 || | |||||| || ||| ||||| | ||||| || || | |||| | || Sbjct 20039850 ATTGTGAATCCACATGCTATTCCATCCCGTATGACTATTGGCCAGCTGATTGAGTGTATT 20039909 Query 201744 ATGGGTAAA 201752 ||||||||| Sbjct 20039910 ATGGGTAAA 20039918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279901708000