Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 7e-11 >seq5 Length=20807039 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 ||||| || || | ||| | || | ||| | || || || || || ||||||||||| Sbjct 6507197 TGGCCACCACGGAGACGGAGCACCAGATGCAAGGTGGACTCCTTCTGGATGTTGTAATCT 6507256 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 || |||| || || || || || |||||| | || || || ||||| || || Sbjct 6507257 GCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAATATGAGGCGCTGCTGGTCCGGG 6507316 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || ||||| || ||||| ||| ||| || | | || | |||||||| | || Sbjct 6507317 GGAATGCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTGTCAATCGTGTCTGACGACTCA 6507376 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || | || | || |||||||||||||| || || || |||||||| Sbjct 6507377 ACCTCTAGCGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 6507426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543926718400