Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leersia_20perrieri_20[genbank_20GCA_5F000325765.3_202014-02-21] 12 sequences; 266,687,832 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 4e-12 >seq8 Length=20165712 Score = 87.8 bits (96), Expect = 4e-12 Identities = 121/163 (74%), Gaps = 10/163 (6%) Strand=Plus/Minus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||||| |||||| ||||||| || || ||||||||||| |||| ||| | ||| Sbjct 2651684 GTTCTTTTCAATCGGCAACCCAGTCTTCACAAAATGTCTATCATGGGGCATCGCATTAAA 2651625 Query 305390 GT-ATTATCTGGATTGA-CATTTCGATTAAA--TGTAAGTG-CTTGTACGCCTTATAATG 305444 | || || ||| | | ||||| ||||| ||| || ||| |||| || |||| Sbjct 2651624 ATCATGCCCT--ATTCAACTTTTCGCTTAAACTTGTCTGTCACTT---CGCCGTACAATG 2651570 Query 305445 CGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 | ||||||||||| |||||||||||||||||||| ||||| || Sbjct 2651569 CAGATTTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTC 2651527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812617527532