Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq343112 109 7e-19 >seq343112 Length=461 Score = 109 bits (120), Expect = 7e-19 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 62636 ATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGT 62695 ||| ||| |||||| | || || | |||||| | | | || | || || || | Sbjct 372 ATAGGGTTGTTCCTTTTTGGCAAGCTCACAACTTGTTTTGCACGCCGCATAGTAGATATT 313 Query 62696 TTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 62755 |||||| || | ||| || || | || |||||| ||||| || |||||||| | | | Sbjct 312 TTCAAAAATTTCCTTGTTGAGCTGTTTTGCTTCGGGGCTGTCGAATGGATATCTCATTAA 253 Query 62756 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62815 ||||| || || || | |||||| |||||||||||||| || | ||| | | | || || Sbjct 252 TATAAATGCATCGGCGAGTCCTTGCACACCAATACCGATTGGCCGATGACGCATGTTCGA 193 Query 62816 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62873 |||| || || || ||||||| ||| || || ||||| || ||||||||| || Sbjct 192 ATTTTCTGCCTCCTTAACTGGATAATGATTTATGTCAATAATCTTGTTGAGATTTTTG 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 624572951390400