Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq250615 98.7 3e-16 >seq250615 Length=590 Score = 98.7 bits (108), Expect = 3e-16 Identities = 170/246 (69%), Gaps = 11/246 (4%) Strand=Plus/Plus Query 20692 GCCGATGTCTACATCTACGACGAGATCGGTGAGTCGTGGTGGGGCGGCATCGCC-CCGAA 20750 ||||| || | |||||||||||||||||| || | || | || ||| |||| Sbjct 302 GCCGAGGTGTCCATCTACGACGAGATCGG------GTTCTTCGGAGTCACCGCTGCCGAC 355 Query 20751 GGCGCTGGTCGATGAGATCACCGCGCTCGACGTCGCCGAGATGACCGTCCACATCAACAG 20810 || || | ||| | |||| || ||| ||| |||| | ||| |||||| Sbjct 356 TTCG----TCAAGGAGCTGGGCGCGGTCAACGCCGCGTCCATGAACATCCGGATCAACTC 411 Query 20811 CCCCGGCGGGGCCGCATGGGACGGCATCACGATCATGAACGCACTGCGCGCCCACAAGGC 20870 ||| ||||||| || | ||||||||| ||||| ||||||| |||||||| ||| ||| Sbjct 412 CCCGGGCGGGGACGTTTTCGACGGCATCGCGATCCTGAACGCCCTGCGCGCGCACCCGGC 471 Query 20871 GCAGGTGCACGTGGTCGTCGACGGTCTCGCCGCGTCGGCGGCGTCGGTGATCGCGATGGG 20930 | | ||| ||| ||||| |||||||||||||| || || | ||||| |||| Sbjct 472 CAACAAGACGGTGACCGTGGACGGCCTCGCCGCGTCGGCCGCATCCTTCATCGCCATGGC 531 Query 20931 CGGCGA 20936 ||| || Sbjct 532 CGGTGA 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147073639407320