Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq88849 399 2e-106 seq12173 297 2e-75 seq353702 163 3e-35 seq6868 154 1e-32 seq307656 123 2e-23 seq385372 116 4e-21 seq113513 113 4e-20 seq37865 109 5e-19 seq99491 102 8e-17 seq87352 102 8e-17 seq25253 98.7 1e-15 seq12510 96.9 3e-15 seq399903 95.1 1e-14 seq272473 91.5 1e-13 seq117604 89.7 5e-13 seq211562 86.0 6e-12 seq59492 86.0 6e-12 >seq88849 Length=1251 Score = 399 bits (442), Expect = 2e-106 Identities = 606/852 (71%), Gaps = 23/852 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| ||||| || || ||||||| || ||| |||||| Sbjct 40 TTCTGGTACTCGCCGACGCGCTTCTCGAAAAAGTTGGTCTTTCCCTGCAGGGAGATGAGC 99 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || |||||||||| | ||||||| || || || | || | | |||| Sbjct 100 TCCATCCAGTCGAAGGGGTTGGTGGCGTTGTAGAGCCTGCCGCAGCCGAGCGCCATGAGC 159 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | |||||| |||||||||||||| || |||| |||| || | || | || Sbjct 160 AGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGC 219 Query 132784 -CGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 |||| |||||||| ||| || ||| || |||||||| | || || || |||||| Sbjct 220 GCGCAT-GGCAGCGCGTCGCAGACGAACTCGC-GCTCGATGTCAACAGCCTCCCTGACGA 277 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CTTGAACATCAAGCAAGC 132899 | || ||||||| | || | || |||| || | | || | | | | ||| || Sbjct 278 TCTCGAACACGCGCGACTCGTCCAGC--TTGCCCCGGAGGATCTCGTAGAGGAGGCAGGC 335 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||||| || | |||||||| | || ||||| |||||| ||| || | |||||| Sbjct 336 GAAGTCGCAGTGGAGCCCCTCGTCGCGTGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGG 395 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 |||||| || || || |||||||| || |||||| ||| |||||| ||||||| ||| Sbjct 396 CATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCC 455 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||||||| ||||| ||||| | |||||| |||| | || || | ||||||| Sbjct 456 CTCGACGCATGCGAACGCCACGATGCGCTCCGCGAA---GCGCTCGCCGCCGTCGATCCA 512 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC----ATCGTTTCGATGGCGTTCA 133135 ||| |||||||| ||||||| | | |||||||| || || ||||||||| | Sbjct 513 GCGGAGCGCCCAGTCGGCCT----TGCGGCGCACGGCGGGGATGGTGTCGATGGCGCGGA 568 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 | | ||| ||||| | | | || | |||||| |||||||| ||| ||||| | Sbjct 569 AGAGGCGGTCCTTCTCGGCGGCGTCGCGGATGTAGGTCTCGATGAGCAGCGAGTACATCT 628 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 ||||||| | |||||| |||||||| || |||||||| ||| ||||||||| |||||| Sbjct 629 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGCGCCTCGGCCACCT 688 Query 133256 GCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 |||| || ||| || | || || ||| |||||||||||| |||||||| Sbjct 689 GCACGTCGGACATGAAGCGGGACGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGA 748 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGT 133372 | ||||| |||||||| |||||| ||||||||| |||| | | | ||||||| Sbjct 749 AGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGCCGTCGGTGAGGGTGGTGTCCCAGT 808 Query 133373 CGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTT 133432 ||||| |||| ||| ||||||||||||||| | ||||| || || ||| |||| || | Sbjct 809 GGCGCGCGTCCGAGGAGAGGTCCACCTCCTCGGCCGTCCAGAAGGAGGCCACGGCCTTCT 868 Query 133433 TGTACATACTCC 133444 |||| | ||||| Sbjct 869 TGTAGA-ACTCC 879 >seq12173 Length=3197 Score = 297 bits (328), Expect = 2e-75 Identities = 589/856 (69%), Gaps = 31/856 (4%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || |||||||| || || || || |||| || ||| |||||| Sbjct 1497 TTCTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGC 1438 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || || |||||||| | |||||| ||||| || | || | | |||| Sbjct 1437 TCCATCCAGTCGAACGGGTTGGCGGCGTTGTACATCTTGGCGCAGCCGAGCGCCATGAGC 1378 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | ||| || |||||||| ||||| || |||| || || | || | || Sbjct 1377 AGGCGGTCTGCGACGAACTCAATGTACTGGCCCATGAGGCCGGCGTTCATGCCGACGAGG 1318 Query 132784 -CGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 |||| || ||||| ||| || ||| | | ||||||| |||| ||||||| ||||| Sbjct 1317 GCGCAGGGG-AGCGCGTCGCAGATGAACTCCCT-CTCGATGTCGACGGCGTCGGCGACGA 1260 Query 132842 TTTCCCTAACGCGCGCCGCG-CTCG---GCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 | || | ||||| | | || | | || |||| | || | | | | ||| Sbjct 1259 TCTCGCGGACGCGGGACTCGTCAAGCTTGCTGTTGAGG---AGGCC-GTAGAGGAGGCAG 1204 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || |||||||| || ||||||||| | || ||||| ||||| ||| || | |||| Sbjct 1203 GCGAAGTCGCAGTGGCGGCCCTCGTCACGCGAGATGAGCACGTTGGAGAAGGTGAGGCCG 1144 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 |||||||| || || || |||||||| || |||||| ||| |||||| ||||| | | Sbjct 1143 GGCATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAATATG 1084 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 ||||||||| ||||| || || || |||||| |||| | || || | ||||| Sbjct 1083 CCCTCGACGCATGCGAAGGCGACGAGTCGCTCGGCGAA---GCGCTCGCCGCCGTCGATC 1027 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC----ATCGTTTCGATGGCGTT 133133 ||||||| ||||| |||||| | | |||||||| | || |||| |||| Sbjct 1026 CAGCGCATGGCCCAGACGGCCT----TGCGGCGCACGGCGGGGACGGTGTCGACGGCGCG 971 Query 133134 CAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACAT 133193 || | ||| ||||| | | || | |||||| |||| || ||| ||||| Sbjct 970 GAAGAGGCGGTCCTTCTCGGCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACAT 911 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253 || ||||| | |||||| |||||||| || |||||||| ||| || |||||| | || Sbjct 910 CTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGCGAC 851 Query 133254 CTGCACTTCTTGAGCGAAACGCTCGA--CCAGATTTTCGTTGACGATGCCGTCGCTGGCG 133311 ||| || || || ||| || || | || || ||| ||||||||||||| |||| Sbjct 850 CTGGACGTC-GGACATGAAC-CTGGAGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCG 793 Query 133312 GCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT---TGTCGTTCAAGCGCTCC 133368 ||||| ||||| |||||||| |||||| |||||||||| | | | || ||| Sbjct 792 GCGAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAGAGCGTGCCGTCC 733 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 |||| ||||| ||| ||| |||||||||||||| | ||||| || |||||| | || Sbjct 732 CAGTGGCGCGCGTCGGAGGAGAGGTCCACCTCCTCCGCCGTCCAGAAGGACGCCACCGCC 673 Query 133429 TTTTTGTACATACTCC 133444 || ||||| | ||||| Sbjct 672 TTCTTGTAGA-ACTCC 658 >seq353702 Length=449 Score = 163 bits (180), Expect = 3e-35 Identities = 289/414 (70%), Gaps = 8/414 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| ||||| || || ||||||| || ||| |||||| Sbjct 410 TTCTGGTACTCGCCGACGCGCTTCTCGAAAAAGTTGGTCTTTCCCTGCAGGGAGATGAGC 351 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || |||||||||| | ||||||| || || || || | | |||| Sbjct 350 TCCATCCAGTCGAAGGGGTTGGTGGCGTTGTAGAGCCTGCCGCACCCGAGCGCCATGAGC 291 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | |||||| |||||||||||||| || |||| |||| || | || | || Sbjct 290 AGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCAACGAGC 231 Query 132784 -CGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 ||||| |||||||| ||| || ||| || |||||||| | || || || |||||| Sbjct 230 GCGCAC-GGCAGCGCGTCGCAGACGAACTCGC-GCTCGATGTCAACTGCCTCCCTGACGA 173 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CTTGAACATCAAGCAAGC 132899 | || ||||| | | || | || |||| || | | || | | | | ||| || Sbjct 172 TCTCGAAGACGCGGGACTCGTCCAGC--TTGCCCCGGAGGATCTCGTAGAGGAGGCACGC 115 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||||| |||| || ||||| | || ||||| |||||| ||| || | |||||| Sbjct 114 GAAGTCGCAGTGCAGCCCTTCGTCGCGTGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGG 55 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 |||||| || || || |||||||| || |||||| ||| |||||| ||||| Sbjct 54 CATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAA 1 >seq6868 Length=3892 Score = 154 bits (170), Expect = 1e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || |||||||| |||||||| | || || ||| | Sbjct 3111 AAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGAGC 3052 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | ||||| | | | |||| | || | ||||||| ||||| || || ||||| | || Sbjct 3051 AGCGACACCATCGACAACG-TCAAGGCTAAAATCCAGGACAAGGAAGGGATTCCGCCGGA 2993 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||||||||| | ||| || || |||||||| |||| ||||| ||| |||||| Sbjct 2992 CCAGCAGCGGCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACGCTCGCCGACTA 2933 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| ||||| |||||||||| ||||||| || | | |||||| Sbjct 2932 CAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGC 2881 >seq307656 Length=504 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | ||||| ||||| || ||| | || || ||||| | Sbjct 300 ATGCAAATCTTTGTCAAGACTTTGACGGGTAAAACTATTACCCTTGAGGTAGAGGCGTCT 359 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | ||| || |||| ||||| || |||||||| | ||||| Sbjct 360 GACACCATTGACAATGTGAAATCGAAGATCCAGGACAAGGAAGGAATTCCGCCAGACCAG 419 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| |||||||| | || || | |||||||||| |||||||||| Sbjct 420 CAGCGTCTCATTTTCGCCGGCAAACAATTAGAGGATGGTCGCACCCTCAGCGACTACAAC 479 Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446 ||||| |||||| | || || || Sbjct 480 ATCCAGAAGGAATCAACTCTCCA 502 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||||||||| || |||| || ||||| | Sbjct 72 ATGCAGATTTTCGTCAAGACTCTAACTGGCAAAACCATTACACTCGAAGTGGAGGCTTCG 131 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || |||||| | |||||||| || || || | ||||| Sbjct 132 GACACTATTGATAATGTCAAGTCAAAAATTCAGGACAAAGAAGGCATACCACCAGACCAG 191 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||||| ||| || ||||| || || |||| ||||| || | |||||| || Sbjct 192 CAACGTCTCATTTTCGCTGGTAAACAACTAGAAGACGGTCGCACTCTAAGCGACTATAAT 251 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || | || || || || ||||| | ||||| || || Sbjct 252 ATCCAAAAAGAGTCTACCCTTCACTTAGTGCTCAGATTGAGGGGAGG 298 >seq385372 Length=416 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320 || || |||||||| |||||||| | || || ||| || ||||| | | | |||| | Sbjct 1 ACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACG-T 59 Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380 || | ||| |||| || || ||||| || || ||||||| ||||||||||| | ||| Sbjct 60 CAAGGCAAAGATCCAGGATAAGGAGGGCATCCCGCCCGACCAGCAGCGGCTCATCTTCGC 119 Query 38381 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGAC 38440 ||||| ||||| || |||| | ||||||| |||||||||| | || ||||| | || Sbjct 120 CGGCAAGCAGCTCGAGGACGGCCACACCCTCGCCGACTACAACGTGCAGAAGGAGTCCAC 179 Query 38441 GCTGCATTTGGTGCTGCG 38458 ||| || | ||||| || Sbjct 180 GCTACACCTCGTGCTCCG 197 >seq113513 Length=1062 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || |||||||| |||||||| | || || ||| | Sbjct 782 AAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGAGC 841 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | ||||| | | | |||| | || | || |||| ||||| ||||| || | | || Sbjct 842 AGCGACACCATCGACAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGCATCACTCCGGA 900 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | | |||||| ||||| Sbjct 901 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTCGCTGACTA 960 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||||||| | || || || ||||||| || Sbjct 961 CAACATCCAAAAGGAGTCCACCCTCCACCTGGTGCTCCG 999 >seq37865 Length=1986 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || || ||||||| ||||||||||| | ||||||||| ||||| || Sbjct 4 GACAAGGAGGGCATCCCGCCCGACCAGCAGCGGCTCATCTTCGCGGGCAAGCAGCTCGAG 63 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||||||| |||||||||| | || ||||| | || ||||| | ||||| Sbjct 64 GACGGCCGCACCCTCGCCGACTACAACGTGCAGAAGGAGTCCACACTGCACCTCGTGCTC 123 Query 38457 CGTTTGAGAGGCGGC 38471 || || | |||||| Sbjct 124 CGCCTGCGCGGCGGC 138 >seq99491 Length=1162 Score = 102 bits (112), Expect = 8e-17 Identities = 105/135 (78%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 38344 AGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 ||||| ||||||| ||||| |||||||| || | ||| || || |||||||| || | Sbjct 772 AGGGA--TCCCGCCAGACCAGCAGCGGCTGATCTTCGCCGGAAAGCAGCTGGAGGAAGGC 829 Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 ||||| || ||||||||||||||| ||||| ||||||| || ||||||| || | Sbjct 830 CGCACGCTTGCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTGCTCCGCCTC 889 Query 38463 AGAGGCGGCCGCCGC 38477 |||||||| ||||| Sbjct 890 CGAGGCGGCAGCCGC 904 >seq87352 Length=1264 Score = 102 bits (112), Expect = 8e-17 Identities = 135/185 (73%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||| ||| |||| |||||| || | Sbjct 1081 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 1140 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || | |||| Sbjct 1141 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCC 1199 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| | ||| ||||| || || | ||||| || | | |||||| Sbjct 1200 GCAGCGCCTCATTTTCGCCGTCAAGCAGCTTGAGGATGGCCGCACTCTGACAGCCTACAA 1259 Query 38423 CATCC 38427 ||||| Sbjct 1260 CATCC 1264 >seq25253 Length=2390 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| | ||| ||||| | ||| || || |||||||| |||| ||||||||| |||| Sbjct 14 GACCAGCGGCGCCTCATCTTCGCCGGTAAGCAGCTGGAGGACGGCCGCACCCTCGCCGAC 73 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| ||||| ||||||||| ||||||| ||| || | || ||| Sbjct 74 TACAACATCCAGAAGGAGTTGACGCTGCACCTGGTGCTCCGTCTGCGCGGAGGC 127 >seq12510 Length=3164 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| |||||||| | || |||||| || | Sbjct 2875 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACACTTGAAGTCGAGTCCTCT 2934 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || |||| ||||| ||| | || ||| | ||||| Sbjct 2935 GATACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGTGCATCCCCCCGGACCAG 2994 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 | ||| || || | ||| || || |||||||| || | |||||||| || |||||| Sbjct 2995 CGGCGACTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGGCGGATTACAAC 3054 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| | || || || |||| || || || | || ||| Sbjct 3055 ATCCAGAAGGAGTCCACCCTCCACCTGGTTCTCCGCCTGCGTGGTGGC 3102 >seq399903 Length=402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||||||| |||| ||||||||||| | ||| || || |||||||| |||| || || | Sbjct 143 TCCCGCCGGACCAGCAGCGGCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGGACGC 202 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | |||||||||||||| ||||| |||||||||| ||||||| || Sbjct 203 TAGCAGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCG 251 >seq272473 Length=553 Score = 91.5 bits (100), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 38346 GGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCG 38404 ||||| ||||||| |||| ||||| || || | ||| || || |||||||| |||| || Sbjct 186 GGAAT-CCCGCCGGACCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAGGACGGCCG 244 Query 38405 CACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || ||||||||||||||| ||||| ||||||| || ||||||| || Sbjct 245 CACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTGCTCCG 298 >seq117604 Length=1036 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| ||||| | || || ||||| || || | ||| || || |||||||| Sbjct 1036 GACAAGGAGGGCATTCCTCCGGATCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAG 977 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| |||| ||||| ||||||| Sbjct 976 GATGGCCGCACCCTGGCAGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTGCTC 917 Query 38457 CG 38458 || Sbjct 916 CG 915 >seq211562 Length=670 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/173 (71%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||||||||| ||||| || || ||||| || |||| || || || ||| | ||| Sbjct 175 GATTTGAAATCCGTAGAAACAACGCGCTTCAGCCACTTGGACCTCGCCGCTGAACCTCTC 116 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 || || || |||||||||||||| || ||||| || || || |||||||| ||||| Sbjct 115 GATAAGGTTCTCGTTGACGATGCCATCAGACGCGGCAAAGAAAGCAAGCACGTGTTTGAT 56 Query 133338 GAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGG 133387 ||| || ||||| |||| | ||||||||| || ||||||||| Sbjct 55 GAAGTGTTTCTCGTCAGAATTCAGTTTGTTATCCCAGTCGTGCATGTCCTTGG 3 >seq59492 Length=1577 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||||||| |||| ||||| || || | || || || |||||||| || | || || | Sbjct 182 TCCCGCCGGACCAGCAGCGTCTGATCTTTGCCGGGAAGCAGCTGGAGGATGGCCGGACGC 241 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | ||||||||||||||| ||||| ||||||||||| ||||||| || Sbjct 242 TGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCATCTGGTGCTCCG 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496007736051200