Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq582361 96.9 1e-15 >seq582361 Length=252 Score = 96.9 bits (106), Expect = 1e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 17212 CTACGATTTTTGGCCGTTTCAGGTTTCAGGCCTGGAGCTATCAACAGACCAGGCGGCGGA 17271 ||| || || ||||| |||||||| ||| | ||| | | || ||||||||||| || | Sbjct 19 CTATGAATTCTGGCCCTTTCAGGTAACAGACATGGCGATGTCTACAGACCAGGCCGCACA 78 Query 17272 GCCGTCTCTTAGCGTTTCCAACCTCGACGGTCATATCACGGCGCTGTGCCTCCAATTTAA 17331 ||| ||| || ||||| ||||| || |||||||| || || || ||||| Sbjct 79 GCCCCGGCTTGAAGTCAGTAACCTTGACGGAACCATAACGGCGCTTTGTCTTCAGTTTAA 138 Query 17332 GGATATGGTTAACGCCAAAGTGAGCATTATCGATACCTATGCGGTTTATCTCGATGCCGT 17391 ||| ||| ||||||||| ||| | ||||| || || | ||| | ||||| || ||||| Sbjct 139 GGACATGCTTAACGCCAGAGTCAAGATTATAGACACTTTTGCAGAGTATCTTGACGCCGT 198 Query 17392 GAA 17394 || Sbjct 199 TAA 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157267553456080