Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20]
666,180 sequences; 481,479,386 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq88849 174 2e-38
seq12173 172 5e-38
seq5401 136 4e-27
seq353702 134 1e-26
seq385372 131 2e-25
seq6868 131 2e-25
seq307656 127 2e-24
seq113513 125 7e-24
seq12734 120 3e-22
seq87352 118 1e-21
seq83756 118 1e-21
seq138762 116 4e-21
seq213696 109 5e-19
seq37865 107 2e-18
seq17435 87.8 2e-12
seq263623 86.0 6e-12
seq21142 84.2 2e-11
seq32537 82.4 7e-11
>seq88849
Length=1251
Score = 174 bits (192), Expect = 2e-38
Identities = 514/771 (67%), Gaps = 30/771 (4%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||||||||||||||| ||||| |||||||| || || |||| || || ||| |
Sbjct 42 CTGGTACTCGCCGACGCGCTTCTCGAAAAAGTTGGTCTTTCCCTGCAGGGAGATGAGCTC 101
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTT-CGGCTGGCCCAACTGTACGAGCA 120469
||| | ||||| |||||| | ||||| || | | || | || | | | |||||
Sbjct 102 CATCCAGTCGAAGGGGTTGGTGGCGTTGTAGAGCCTGCCGCAG-CCGAGCGCCATGAGCA 160
Query 120470 GTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACG 120529
| ||||| || || ||||| ||||||| || |||| | |||||||||| | | ||
Sbjct 161 GGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGCG 220
Query 120530 CCACCGGCAACGCCGACGT-GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588
| |||| ||| | || || ||||| ||| ||||| || |||||| ||| ||
Sbjct 221 CGCATGGCAGCGC-GTCGCAGACGAACTCGCGCTCGATGTCAACAGCCTCCCTGACGATC 279
Query 120589 GCGAGCATAGTGTGGC-CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647
||| || | | | | || || |||| || | | ||| ||| ||||| ||
Sbjct 280 TCGAACAC-GCGCGACTCGTCCAGCTTGCCCCGGAGGATC--TCG-TAGAGGAGGCAGGC 335
Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707
||||| ||| || ||||||||||| || || ||||||||| || || ||||||||
Sbjct 336 GAAGTCGCAGTGGAGCCCCTCGTCGCGTGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGG 395
Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767
||||| || | |||||| |||| |||||| ||| |||||| ||||| | |||
Sbjct 396 CATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCC 455
Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAA-CG-TCGCCGTCTTGCTGTCGATC 120825
||| ||| || || || || |||||||| || || || ||||| || |||||||
Sbjct 456 CTCGACGCATGCGAACGCCACGATGCGCTCCGCGAAGCGCTCGCC-----GCCGTCGATC 510
Query 120826 CACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGC 120885
|| | ||||| |||||||| ||||||| || || |||| ||| |
Sbjct 511 CAGCGGAGCGCCCAGTCGGCCTTGCGGCGCACGGCGGGGATGGTGTCGATGGCGCGGAAG 570
Query 120886 AGCATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGATTGTACATTTC 120944
|| ||| |||| | | || || | || | | ||||||||| |||||| ||
Sbjct 571 AGGCGGTCCTTCTCGGCGGCGTCGCGGATGTAGGT-CTCGATGAGCAGCGAGTACATCTC 629
Query 120945 CGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGG 121004
|| ||| | | |||||| | || | ||| ||| |||| | |||||
Sbjct 630 CGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAG----GCGC--GCGCCTCGGC 683
Query 121005 CACC-GCCCGCTG--CATGTA-CTCGA--TAAGGTTAATATTCACGATACTGTCGGCGGC 121058
|||| || || | |||| | | || ||||| |||||| | ||||| |||
Sbjct 684 CACCTGCACGTCGGACATGAAGCGGGACGCGAGGTTCTCGAGCACGATGCCGTCGGAGGC 743
Query 121059 GGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAG 121109
||||||||| || |||||||| ||| ||||| |||||| |||| |||||
Sbjct 744 GGCGAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGCCGTCGGTGAG 794
>seq12173
Length=3197
Score = 172 bits (190), Expect = 5e-38
Identities = 357/515 (69%), Gaps = 20/515 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| |||||||| || |||||||| ||||| || ||||||| || || ||| |
Sbjct 1495 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTC 1436
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTG-GCCCAACTGTACGAGCA 120469
||| | |||||||||||| ||||| | || | ||| ||| | | | |||||
Sbjct 1435 CATCCAGTCGAACGGGTTGGCGGCGTTGTAC-ATCTTGGCGCAGCCGAGCGCCATGAGCA 1377
Query 120470 GTCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAAC 120528
| ||||| || || ||||||||||||| || |||| | | | ||||||||||| | |
Sbjct 1376 GGCGGTCTGCGACGAACTCAATGTACTGGCCCATGAGGCCG-GCGTTCATGCCGACGAGG 1318
Query 120529 GCCACCGGCAACGCCGACGT-GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT 120587
|| || | ||| | || || |||||| |||| ||||| || || || || ||
Sbjct 1317 GCGCAGGGGAGCGC-GTCGCAGATGAACTCCCTCTCGATGTCGACGGCGTCGGCGACGAT 1259
Query 120588 GGCGAGCATAGTGTGGCCGGGCAT-CTTG-TGTTCGATGCGCGTTCGGTAGTACAGGCAC 120645
|| | | | | | | | || |||| |||| || | | | |||| |||||
Sbjct 1258 CTCGCGGAC-GCGGGACTCGTCAAGCTTGCTGTT-GAGGAGG---CCGTAGAGGAGGCAG 1204
Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705
|| ||||| ||| |||||||||| ||||| || ||| ||||| || || ||||||
Sbjct 1203 GCGAAGTCGCAGTGGCGGCCCTCGTCACGCGAGATGAGCACGTTGGAGAAGGTGAGGCCG 1144
Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765
||||||| || | |||||| |||| |||||| ||| |||||| ||||| | |
Sbjct 1143 GGCATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAATATG 1084
Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAA-CG-TCGCCGTCTTGCTGTCGA 120823
||||| ||| || |||||||| | |||||||| || || ||||| || |||||
Sbjct 1083 CCCTCGACGCATGCGAAGGCGACGAGTCGCTCGGCGAAGCGCTCGCC-----GCCGTCGA 1029
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACG 120858
|||| ||||||||| ||||||| |||||||
Sbjct 1028 TCCAGCGCATGGCCCAGACGGCCTTGCGGCGCACG 994
>seq5401
Length=4188
Score = 136 bits (150), Expect = 4e-27
Identities = 151/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || || || || | | ||| | | | ||||||||||||||||
Sbjct 4130 GGTGGACTCCTTCTGGATGTTATAGTCTGCGAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 4072
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| ||||||||||| || |||||||| ||||| || ||||| ||
Sbjct 4071 CAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGAATCTTAGCCT 4012
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||| | || |||||| || | ||||| ||| ||||||||||| |
Sbjct 4011 TGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGG 3952
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 3951 TCTTCACGAAGATCTGCAT 3933
>seq353702
Length=449
Score = 134 bits (148), Expect = 1e-26
Identities = 285/418 (68%), Gaps = 17/418 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||||||||||||||| ||||| |||||||| || || |||| || || ||| |
Sbjct 408 CTGGTACTCGCCGACGCGCTTCTCGAAAAAGTTGGTCTTTCCCTGCAGGGAGATGAGCTC 349
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACG----- 120465
||| | ||||| |||||| | ||||| || | ||| | || | | ||
Sbjct 348 CATCCAGTCGAAGGGGTTGGTGGCGTTGTAGA-----GCCTGCCGCACCCGAGCGCCATG 294
Query 120466 AGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGC 120525
||||| ||||| || || ||||| ||||||| || |||| | |||||||||| |
Sbjct 293 AGCAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCAACG 234
Query 120526 AACGCCACCGGCAACGCCGACGT-GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAA 120584
| ||| ||||| ||| | || || ||||| ||| ||||| || |||||| |||
Sbjct 233 AGCGCGCACGGCAGCGC-GTCGCAGACGAACTCGCGCTCGATGTCAACTGCCTCCCTGAC 175
Query 120585 CATGGCGAGCATAGTGTGGC-CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643
|| ||| | | | | | || || |||| || | | ||| ||| ||||
Sbjct 174 GATCTCGAAGAC-GCGGGACTCGTCCAGCTTGCCCCGGAGGATC--TCG-TAGAGGAGGC 119
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
|||| ||||| |||||| || |||||||| || || ||||||||| || || ||||
Sbjct 118 ACGCGAAGTCGCAGTGCAGCCCTTCGTCGCGTGAGATGAGCTCGTTGGAGAAGGTGAGGC 59
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761
||||||||| || | |||||| |||| |||||| ||| |||||| |||||
Sbjct 58 CGGGCATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAA 1
>seq385372
Length=416
Score = 131 bits (144), Expect = 2e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGC 133517
|||| |||||||| ||||| | ||||| ||| | | ||| |||||||||||||
Sbjct 185 TGTAGCGTGGACTCCTTCTGCACGTTGTAGTCGGCGAGGGTGTGGCCGTCCTCGAGCTGC 126
Query 133518 TTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTT 133577
||||| ||| | |||||||||||||||||||| |||||||| ||||| || |||||||
Sbjct 125 TTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATGCCCTCCTTATCCTGGATCTTT 66
Query 133578 TGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTC 133637
||||| | || | |||||| || |||||| || | |||| ||| ||||| |||
Sbjct 65 GCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTGCCCGTC 6
Query 133638 AGAGT 133642
|| ||
Sbjct 5 AGGGT 1
>seq6868
Length=3892
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| | | |||| |||||| |||||||| ||
Sbjct 2912 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCCAGCTGCTTCCCG 2971
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||||||||||||||| || || || ||||||||||| ||| || ||||
Sbjct 2972 GCGAAGATGAGCCGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTG 3031
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | |||||| || |||||| || | |||| ||| ||||| ||||| ||
Sbjct 3032 ACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTC 3091
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 3092 TTCACGAAGATCTGCAT 3108
>seq307656
Length=504
Score = 127 bits (140), Expect = 2e-24
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| |||||||| || ||||| || |||| | ||| ||| ||| || ||
Sbjct 277 AAGTGAAGGGTAGACTCTTTTTGGATATTATAGTCGCTTAGAGTGCGACC-GTCTTCTAG 219
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| || || ||| ||||||| || |||||||| || || |||||||| ||||| |||
Sbjct 218 TTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGTGGTATGCCTTCTTTGTCC-TGAA 160
Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||||| ||||| | |||| ||||| | | |||||| |||| || | ||||||||
Sbjct 159 TTTTTGACTTGACATTATCAATAGTGTCCGAAGCCTCCACTTCGAGTGTAATGGTTTTGC 100
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| || ||||||||||||||
Sbjct 99 CAGTTAGAGTCTTGACGAAAATCTGCAT 72
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| || ||||| |||| | ||| ||| | ||||| | || |||||
Sbjct 496 GTTGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCA-TCCTCTAATTGTTTGCC 438
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| ||||||||||| || || || ||||||||||| |||||| ||
Sbjct 437 GGCGAAAATGAGACGCTGCTGGTCTGGCGGAATTCCTTCCTTGTCCTGGATCTTCGATTT 378
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| ||||| | | ||| || || | ||| | ||||| || |||| |||
Sbjct 377 CACATTGTCAATGGTGTCAGACGCCTCTACCTCAAGGGTAATAGTTTTACCCGTCAAAGT 318
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || || |||||
Sbjct 317 CTTGACAAAGATTTGCAT 300
>seq113513
Length=1062
Score = 125 bits (138), Expect = 7e-24
Identities = 150/201 (75%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTT 133519
||||||||| || || || ||||| || | | || || | | ||||||||||||||
Sbjct 982 GGTGGACTCCTTTTGGATGTTGTAGTCAGCGAGGGTCCTG--CCA-TCCTCGAGCTGCTT 926
Query 133520 GCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG 133579
||| || | ||||| ||||||||||| |||| |||||| |||||||| ||||||
Sbjct 925 GCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGTGATGCCCTCCTTGTCCTGGATCTTAGC 866
Query 133580 CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639
||||| | || | |||||| || |||||| || | |||| ||| ||||| |||||
Sbjct 865 CTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTGCCCGTCAG 806
Query 133640 AGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||
Sbjct 805 GGTCTTCACGAAGATCTGCAT 785
>seq12734
Length=3143
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571
|||||||| || ||| | |||||||||||||||| || ||||| ||||||||||| |
Sbjct 3141 AGCTGCTTCCCGGCGAAGTTGAGCCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGG 3082
Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
|||||| ||||| | || | |||||| || ||| || |||| ||||| ||| |||
Sbjct 3081 ATCTTTGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTCTTG 3022
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || ||||| ||||||||
Sbjct 3021 CCCGTCAGGGTCTTGACGAAGATCTGCAT 2993
>seq87352
Length=1264
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||| | ||| ||||||| |||||| |||| ||||||||||| ||||||
Sbjct 1235 TCCTCAAGCTGCTTGACGGCGAAAATGAGGCGCTGCGGGTCTGGAGGGATGCCCTCCTTG 1176
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || ||| || |||| ||| | |
Sbjct 1175 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTAATG 1116
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || || || || || ||||||||
Sbjct 1115 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 1081
>seq83756
Length=1298
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| |||||||| || || | ||||| ||||||||||| ||||||||||| ||||||
Sbjct 1 TCCTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTG 60
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||||| ||| | | || | ||||| | || |||||| || | ||||| |
Sbjct 61 TCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATG 120
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || || || || || ||||||||
Sbjct 121 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 155
>seq138762
Length=915
Score = 116 bits (128), Expect = 4e-21
Identities = 146/199 (73%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| | ||||| || | ||| ||||||||||||||| |||
Sbjct 681 GTGGACTCCTTCTGCACGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCC 622
Query 133524 -GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||| | || |||||||| | |||||| |||||| |||
Sbjct 621 GGCGAAGATGAGACGCTGCTGGCCCGGCGGGATGCCCTGCTTGTCCTGGATCTTAGCCTT 562
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| |||||| || |||||| || | |||| ||| ||||| ||||| ||
Sbjct 561 AACGTTGTCAATGGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGT 502
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 501 CTTCACGAAGATCTGCATG 483
>seq213696
Length=664
Score = 109 bits (120), Expect = 5e-19
Identities = 133/181 (73%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGC 133517
|| || |||||||| ||||| || |||||||| | | ||| |||||| ||||||
Sbjct 420 TGGATTGTGGACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGGCCGTCCTCCAGCTGC 361
Query 133518 TTGCCCGCGTAAATGAGCCGCTGCTG---GTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| ||| | || || |||||||| ||| || |||||||||||||| || ||||
Sbjct 360 TTGCCGGCGAAGATCAGTCGCTGCTGCTGGTCCGGCGGGATGCCTTCCTTATCCTGGATC 301
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | |||| ||||| | || ||| || |||| ||||| ||| ||||||
Sbjct 300 TTCGCCTTAACATTGTCAATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCG 241
Query 133635 G 133635
|
Sbjct 240 G 240
>seq37865
Length=1986
Score = 107 bits (118), Expect = 2e-18
Identities = 86/104 (83%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| | ||||| ||| | | ||| |||||||||||||||||||
Sbjct 107 GTGGACTCCTTCTGCACGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCC 48
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
||| | |||||||||||||||||||| |||||||| ||||||||
Sbjct 47 GCGAAGATGAGCCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 4
>seq17435
Length=2785
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | |||||||||||||| || |||||||| ||| ||| | || || | |
Sbjct 1819 AAATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGCCAATGTGCGCCCATCTTCCAAC 1760
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
||||| || || |||| |||| |||||||| || |||||||||||||||||
Sbjct 1759 TGCTTTCCAGCAAAAATTAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTC 1707
>seq263623
Length=567
Score = 86.0 bits (94), Expect = 6e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 133551 GGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCC 133610
|||||||| |||||||| |||||| ||||| | || | ||||| | | |||
Sbjct 567 GGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCA 508
Query 133611 ACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||| ||||| ||| ||||||||||||||||| ||||| ||||||||
Sbjct 507 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 458
>seq21142
Length=2581
Score = 84.2 bits (92), Expect = 2e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || |||| ||| ||| ||| ||| ||||||||||| |||
Sbjct 2020 GTGGACTCCTTCTGGATGCTGTAGTCGGCCAGGGTGCGGCCGTCATCGAGCTGCTTCCCC 1961
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559
||| | ||||| ||||||||||| || |||||||||
Sbjct 1960 GCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCT 1925
>seq32537
Length=2132
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| || ||||| || ||||| || | | ||| | | | ||||||||||||||||
Sbjct 96 GGTGGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 38
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCC 133558
| ||| | ||||| ||||||||||| |||||||||||
Sbjct 37 CAGCGAAGATGAGTCGCTGCTGGTCCGGAGGGATGCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479395234143200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |