Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq307656 116 3e-21 >seq307656 Length=504 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||| || || |||||||| | || || ||||| || |||||||| | Sbjct 265 GACTCTTTTTGGATATTATAGTCGCTTAGAGTGCGACCGTCTTCTAGTTGTTTACCAGCG 206 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| || || ||||| |||||||||||||| || ||||||| || | Sbjct 205 AAAATGAGACGTTGCTGGTCTGGTGGTATGCCTTCTTTGTCCTGAATTTTTGACTTGACA 146 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| || | | ||||||||||| || | ||||| ||||| ||||| || Sbjct 145 TTATCAATAGTGTCCGAAGCCTCCACTTCGAGTGTAATGGTTTTGCCAGTTAGAGTCTTG 86 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 85 ACGAAAATCTGCAT 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472642339384800