Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq17435 87.8 1e-12 >seq17435 Length=2785 Score = 87.8 bits (96), Expect = 1e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| ||||| | || || |||||| || |||||||||| ||||| || ||||| Sbjct 1707 GACAAGGAAGGCATCCCCCCAGACCAGCAAAGGCTAATTTTTGCTGGAAAGCAGTTGGAA 1766 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 || | |||| ||| | |||||||||||||| |||||| |||| | |||||||| Sbjct 1767 GATGGGCGCACATTGGCTGATTACAACATCCAGAAAGAGTCCACTCTCCATTTGGT 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 352973128708860