Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq343112 91.5 2e-13 >seq343112 Length=461 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 75977 TCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATC 76036 ||||||| || || || ||||| | | |||| | || || || |||| ||||| Sbjct 362 TCCTTTTTGGCAAGCTCACAACTTGTTTTGCACGCCGCATAGTAGATATTTTCAAAAATT 303 Query 76037 TTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCA 76096 | ||| || || | || ||||| | || || || ||||| | | ||||||||| Sbjct 302 TCCTTGTTGAGCTGTTTTGCTTCGGGGCTGTCGAATGGATATCTCATTAATATAAATGCA 243 Query 76097 TCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCT 76156 || || ||||| || || |||||||| || || | ||| | | | || ||| |||| || Sbjct 242 TCGGCGAGTCCTTGCACACCAATACCGATTGGCCGATGACGCATGTTCGAATTTTCTGCC 183 Query 76157 TCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTG 76204 || || || |||| ||| || || ||||| || ||||||||| || Sbjct 182 TCCTTAACTGGATAATGATTTATGTCAATAATCTTGTTGAGATTTTTG 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 706997617017600