Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lolium_20perenne_20[genbank_20GCA_5F001735685.1_202016-09-20] 666,180 sequences; 481,479,386 total letters Query= NC_031251.1 Length=47880 Score E Sequences producing significant alignments: (Bits) Value seq250615 129 2e-25 >seq250615 Length=590 Score = 129 bits (142), Expect = 2e-25 Identities = 139/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 3463 TCCGGATCAACAGCCCGGGCGGCAACGTGTTCGACGGGATCGCGATCCTCAACGCGCTAC 3522 ||||||||||| ||||||||| |||| |||||||| ||||||||||| ||||| || | Sbjct 399 TCCGGATCAACTCCCCGGGCGGGGACGTTTTCGACGGCATCGCGATCCTGAACGCCCTGC 458 Query 3523 GCGGTCACAAGGCCCACGTCACCACCATCGTCGACGGCCTCGCAGCGTCAGCAGCGAGCT 3582 ||| ||| |||| || || | ||| ||||||||||| ||||| || || || Sbjct 459 GCGCGCACCCGGCCAACAAGACGGTGACCGTGGACGGCCTCGCCGCGTCGGCCGCATCCT 518 Query 3583 TCATCGCGATGGCCGGCGACGAGATCGTGATGAATCGCAACGCGGAGATGATGATTCACG 3642 ||||||| |||||||| || | |||| |||| | | | || ||||||||| |||| Sbjct 519 TCATCGCCATGGCCGGTGATGCCATCGAGATGGCCCCCCAGTCGATGATGATGATCCACG 578 Query 3643 ACGC 3646 |||| Sbjct 579 ACGC 582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151883287424720