Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq9 82.4 8e-11
>seq9
Length=34148863
Score = 82.4 bits (90), Expect = 8e-11
Identities = 117/162 (72%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || |||||||||||||| || || ||||| | | |||||| ||||| || || ||
Sbjct 1096995 AGGCAGGCGAAGTCGCAATGAAGGCCCTCGTCACGGGAGATAAGCTCGTTCGAGAAGGTG 1096936
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317
| ||| ||||| || || ||||| | ||| || || || ||| || || || || ||
Sbjct 1096935 AGCCCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATAGC-GCAGAAGGAGCCAGAGAA 1096877
Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC 16359
||| || ||||| ||| | || || |||| | ||| || ||
Sbjct 1096876 GAAGATTCCCTCGACACAGGCGAAGGCGACAATTCGCTCGGC 1096835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511367995535880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |