Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 8e-11 >seq9 Length=34148863 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || |||||||||||||| || || ||||| | | |||||| ||||| || || || Sbjct 1096995 AGGCAGGCGAAGTCGCAATGAAGGCCCTCGTCACGGGAGATAAGCTCGTTCGAGAAGGTG 1096936 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| || || ||||| | ||| || || || ||| || || || || || Sbjct 1096935 AGCCCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATAGC-GCAGAAGGAGCCAGAGAA 1096877 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC 16359 ||| || ||||| ||| | || || |||| | ||| || || Sbjct 1096876 GAAGATTCCCTCGACACAGGCGAAGGCGACAATTCGCTCGGC 1096835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511367995535880