Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 4e-14
>seq5
Length=29377369
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| || ||||||| | || || || ||||| ||| || ||| | ||
Sbjct 457756 ATGCAAATTTTTGTCAAAACCCTCACCGGAAACACCATCACCCTGGAGGTGGAGAGCTCA 457815
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGG--TGTGCCCGTAGATC 29079
|| ||| | ||| ||||||| ||| || || || || || | | ||| ||||
Sbjct 457816 GACACGATCGCCAATCTTAAAGCAAAGATCCATGACAAGGAGGGCATCTCACCG--GATC 457873
Query 29080 AACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACA 29139
| || || || |||||||| || ||||| || || ||| | ||| ||| ||| ||||
Sbjct 457874 AGCAGAGGCTCATCTTTGCCGGGAAACAGCTCGAGGATGGCCGCACTCTGGACGACTACA 457933
Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||||||||| ||||||||| |||| | ||| | || || ||
Sbjct 457934 GCATTCAGAAGGAATCCACTCTTCACCTGGTTCTCCGACTCCGTGGTGG 457982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428298105515645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |