Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq8 131 1e-25
seq11 116 3e-21
seq5 116 3e-21
seq9 113 4e-20
seq6 104 2e-17
seq2973 95.1 1e-14
seq1007 95.1 1e-14
seq1 91.5 1e-13
seq7 87.8 2e-12
>seq8
Length=35439739
Score = 131 bits (144), Expect = 1e-25
Identities = 163/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017
|| || ||||||| ||| | ||||||||||| |||||||||||||| |||| ||| ||
Sbjct 1222297 AGTCTCAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGG 1222356
Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077
| ||||| ||||| ||||| ||| | || || |||||||||||| || | ||| |||
Sbjct 1222357 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCC 1222416
Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG-TTTCCACGG 21135
||||| |||||| || || | | ||| || | ||| |||| || || | ||
Sbjct 1222417 TTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGT--CCGAGCTCTCGACCTCGAGGG 1222474
Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| |||||||||||||| | || || ||||| || |||||
Sbjct 1222475 TGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 1222514
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | |||||||||||| ||||| || || || |||
Sbjct 1222060 CCACCACGGAGGCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGCC 1222119
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||| ||||| ||||| ||| | ||||| |||||||||||| ||
Sbjct 1222120 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGA 1222179
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||||| || || | | ||| || ||| | |||
Sbjct 1222180 ATACCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCGATCGTGTCAGAGCTCTCAACC 1222239
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||| || || | || ||||| || || |||||
Sbjct 1222240 TCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || |||| ||| || | || | ||||||||||| |||||||| ||||| ||
Sbjct 4857995 CCACCGCGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 4857936
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| ||||| ||||| ||| | || || || ||||||||| |||
Sbjct 4857935 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGGG 4857876
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || ||| | ||
Sbjct 4857875 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCTTTCGACC 4857816
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||| ||||| | || || ||||| || |||||
Sbjct 4857815 TCCAAGGTTATGGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 4857769
Score = 113 bits (124), Expect = 4e-20
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017
||||| ||||||| ||| | ||||||||||| || ||||| || || || || || ||
Sbjct 4858214 AGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGAGTGCGG 4858155
Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077
|||| || ||||||||||| ||| | || || || ||||||||| || | ||| |||
Sbjct 4858154 CCGTCTTCGAGCTGTTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGGATGCCCTCC 4858095
Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG-TTTCCACGG 21135
||||| |||||| || || | | ||| || | ||| |||| || |||| ||
Sbjct 4858094 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGT--CCGAGCTCTCGACCTCCAAGG 4858037
Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||||| || || | || || || || || |||||
Sbjct 4858036 TAATGGTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCAT 4857997
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | ||||||||||| |||||||||||||| |||
Sbjct 1223231 CCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 1223290
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| || |||| || ||||| || || || | || || ||||||||||| |||
Sbjct 1223291 AAGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCGGGGGGG 1223350
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | ||| || || || ||
Sbjct 1223351 ATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGATTCAACC 1223410
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| ||||||||||| || | ||||| || || || |||||
Sbjct 1223411 TCTAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 1223457
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | ||||||||||| |||||||||||||| |||
Sbjct 1222516 CCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 1222575
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| || | ||||| ||||| ||||| || | || || ||||| |||||| ||
Sbjct 1222576 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGTTGGTCCGGAGGG 1222635
Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091
| ||| |||||||| ||||||
Sbjct 1222636 ATGCCCTCCTTGTCCTGGATCTT 1222658
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| || ||||| || ||||||| ||||| || ||
Sbjct 32122428 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCG 32122369
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || |||||||||||| || | ||||||||||| |||||| ||
Sbjct 32122368 GCGAAGATGAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTG 32122309
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | ||| || || || |||| || | ||| || ||||| || || | ||
Sbjct 32122308 ACGTTATCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTAAGGGTC 32122249
Query 21159 TTGACAAATATTTGCATTTT 21178
|| || || || ||||| ||
Sbjct 32122248 TTCACGAAGATCTGCATCTT 32122229
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| |||||||| ||||| || |||||| || | ||||||||||| || ||
Sbjct 26900839 GTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCCAGCTGCTTTCCG 26900898
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | |||||| ||| || | ||| |||||||| ||||| |||
Sbjct 26900899 GCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTC 26900958
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | || || | ||| || | ||| || ||||| || || | |||
Sbjct 26900959 ACGTTGTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGCGTC 26901018
Query 21159 TTGACAAATATTTGCATTTTG 21179
|| || || || ||||| |||
Sbjct 26901019 TTCACGAAGATCTGCATCTTG 26901039
>seq11
Length=25514024
Score = 116 bits (128), Expect = 3e-21
Identities = 148/200 (74%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
|||||||||||| || ||||| ||||| || || || || ||||||| ||||| |||||
Sbjct 16241444 AGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCC 16241503
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
|||| | || || || ||||||||| || | |||||||||||| ||||| ||
Sbjct 16241504 CGCAAAGATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTTGGCCTT 16241563
Query 21098 CACCTGGCCGACAGTATCACCGGGCTC-CG-TTTCCACGGTAATGGTCTTGCCGGTTAAC 21155
||| | | ||| || | ||| |||| || ||| | ||| || ||||| ||||| | |
Sbjct 16241564 CACGTTGTCGATGGTGT--CCGAGCTCTCGACTTCGAGGGTGATCGTCTTCCCGGTGAGC 16241621
Query 21156 GTTTTGACAAATATTTGCAT 21175
|| || ||||| || |||||
Sbjct 16241622 GTCTTCACAAAGATCTGCAT 16241641
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | || |||||||| || ||||||||||| ||
Sbjct 15140711 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCG 15140770
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||||||| || || || | || || | |||||||||| ||
Sbjct 15140771 AGGGTGCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 15140830
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||||| | | ||| || || | ||||
Sbjct 15140831 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCACC 15140890
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || ||||| || || || || || || || || |||||
Sbjct 15140891 TCAAGGGTGATCGTCTTCCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937
>seq5
Length=29377369
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | |||||| ||||| |||||| | ||||| ||
Sbjct 457982 CCACCACGGAGTCGGAGAACCAGGTGAAGAGTGGATTCCTTCTGAATGCTGTAGTCGTCC 457923
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| |||||||| || ||| | || || |||||||| ||| |
Sbjct 457922 AGAGTGCGGCCATCCTCGAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGATCCGGTGAG 457863
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| ||||||| ||| | | | ||| || || | ||||
Sbjct 457862 ATGCCCTCCTTGTCATGGATCTTTGCTTTAAGATTGGCGATCGTGTCTGAGCTCTCCACC 457803
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| ||||| || ||||| | ||||||||||| ||||||||
Sbjct 457802 TCCAGGGTGATGGTGTTTCCGGTGAGGGTTTTGACAAAAATTTGCAT 457756
>seq9
Length=34148863
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | ||||| ||||| |||||||| || || |||
Sbjct 33541435 CCACCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 33541376
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| || || || | || || |||||||| ||| ||
Sbjct 33541375 AGGGTGCGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGA 33541316
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | ||| || || | ||||
Sbjct 33541315 ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 33541256
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| ||||| | || || ||||| || |||||
Sbjct 33541255 TCCAAGGTAATGGTCTTCCCGGTGAGGGTCTTAACAAAGATCTGCAT 33541209
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||| || || | |||||||| || | ||||| ||||| |||||||| || || |||
Sbjct 33548969 CCCCCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 33549028
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||||||||| || || ||| | || || |||||||| ||| ||
Sbjct 33549029 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGA 33549088
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||||| || || | | | || || ||||
Sbjct 33549089 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAATCGTGTCCGAACTCTCCACC 33549148
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| || || | ||| || ||||| || |||||
Sbjct 33549149 TCCAAGGTAATGGTCTTCCCTGTGAGCGTCTTAACAAAGATCTGCAT 33549195
>seq6
Length=34899179
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| || | |||||| ||||| || ||||||||||| ||||| || | | |||
Sbjct 13154755 AGGACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGTGTGCGCCCATCC 13154696
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| || |||||| | || || ||||| ||||| || | || ||||||||
Sbjct 13154695 TCGAGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGGGATTCCCTCCTTGTCC 13154636
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | | ||| ||| || | ||| |||| || ||||||
Sbjct 13154635 TGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCCAGAGTGATGGTC 13154576
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | ||||| ||||| ||||||||
Sbjct 13154575 TTCCCCGTGAGGGTTTTCACAAAAATTTGCAT 13154544
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|||||||||||||| ||||| ||||| || ||||| || | ||||| || || |||||
Sbjct 13144359 GTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGTTGCTTGCCA 13144300
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || | || ||||||||| ||| | || ||||| || |||||| |||
Sbjct 13144299 GCAAATATCAACCTTTGCTGGTCCGGGGGTATTCCCTCCTTATCCTGGATCTTGGCTTTG 13144240
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | || ||| || || || | ||| || ||||| || || | |||
Sbjct 13144239 ACATTGTCAATGGTGTCAGAGGATTCAACCTCAAGGGTGATCGTCTTTCCAGTGAGAGTT 13144180
Query 21159 TTGACAAATATTTGCAT 21175
|||||||| ||||||||
Sbjct 13144179 TTGACAAAGATTTGCAT 13144163
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017
||||| ||||||| || | || || ||||| || || |||||||| |||| ||| ||
Sbjct 13154533 AGCCTCAGCACCAAGTGGAGGGTAGATTCCTTCTGGATATTATAGTCAGCCAAGGTGCGG 13154474
Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077
| ||||||| || ||||| ||| | || || ||||||||||| || | ||| |||
Sbjct 13154473 CCATCCTCCAATTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCC 13154414
Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137
||||| |||||| ||||| | | ||| ||| || | ||| || | |||
Sbjct 13154413 TTGTCCTGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCAAGGGTG 13154354
Query 21138 ATGGTCTTGCCGG 21150
|||||||| ||||
Sbjct 13154353 ATGGTCTTACCGG 13154341
>seq2973
Length=40044
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | ||| |||||||| || ||||| ||||||||
Sbjct 14961 CCGCCACGGAGGCGGAGCACTAGGTGGAGAGTCGACTCCTTCTGTATGTTGTAGTCCGCA 14902
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || |||||||||||||||| || || | || || || ||||||||| ||
Sbjct 14901 AGCGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATTAGCCTTTGCTGGTCCGGCGGG 14842
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCAC 21100
| || |||||||| |||||| ||||||
Sbjct 14841 ATCCCCTCCTTGTCTTGAATCTTTGCTTTCAC 14810
>seq1007
Length=1704909
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| || | || | ||||||||||| || ||||| ||||| ||
Sbjct 32301 CCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 32360
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| || || || | || || | |||||||||| ||
Sbjct 32361 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCTGAGGA 32420
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | ||| | || | ||||
Sbjct 32421 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGCGTCCGATGACTCCACC 32480
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|| | |||||| ||||| ||||| | || || || || || ||||| ||
Sbjct 32481 TCGAGGGTAATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 32530
>seq1
Length=27573629
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||| || || | ||| || | || | ||||||||||| || ||||| ||||| ||
Sbjct 19376096 CCCCCACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCG 19376155
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||| ||||| || || ||| | || || | |||||||||| ||
Sbjct 19376156 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCAAATATGAGGCGCTGCTGGTCCGGCGGG 19376215
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | ||| || || | ||||
Sbjct 19376216 ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 19376275
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|| | ||| || ||||| ||||| | || || || || || ||||| ||
Sbjct 19376276 TCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 19376325
>seq7
Length=28617404
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || | |||||||| || | |||| ||| ||||| || || ||||| || || |
Sbjct 27638071 TTCCGCCCCTAAGCCTGAGGACAAGGTGCAGAGTTGACTCTTTCTGGATGTTGTAATCAG 27638130
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|||||||| || | || |||||||| || || ||| | || | |||||||||||| |
Sbjct 27638131 CCAGGGTTCGGCCATCTTCCAGCTGCTTACCTGCAAAGATCAATCTCTGCTGGTCTGGAG 27638190
Query 21067 GCACGCCTTCCTTGTC 21082
| | || ||||||||
Sbjct 27638191 GTATCCCCTCCTTGTC 27638206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422221843124444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |