Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq8 161 9e-35
seq5 134 1e-26
seq9 131 1e-25
seq4576 125 6e-24
seq11 116 3e-21
seq3 111 1e-19
seq1007 107 2e-18
seq6 107 2e-18
seq1 107 2e-18
>seq8
Length=35439739
Score = 161 bits (178), Expect = 9e-35
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | | ||||| ||||| || | || ||||| || |||||||| || |||
Sbjct 1222286 TACCTCCCCTGAGTCTCAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGG 1222345
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||||||||| || || || ||||||| | |||||| || ||||
Sbjct 1222346 CCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGAG 1222405
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || ||||| | |||| ||||||| ||||||||
Sbjct 1222406 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTCGA 1222465
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | || |||||||| ||||| || ||||| ||||||||
Sbjct 1222466 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 1222514
Score = 129 bits (142), Expect = 5e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| ||||| |||| || ||||| || || |||||||||||| | ||||||
Sbjct 4858211 CTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGAGTGCGGCCG 4858152
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| ||||||||||| || || ||||||| | ||||| || || || ||||||||||||
Sbjct 4858151 TCTTCGAGCTGTTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGGATGCCCTCCTTG 4858092
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || | |||| ||||||| |||||||||||| | ||| |
Sbjct 4858091 TCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAGCTCTCGACCTCCAAGGTAATG 4858032
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || ||||| || || || |||||||||
Sbjct 4858031 GTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCATG 4857996
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || |||| | | ||| | ||||| || ||||| || |||||||| || |||
Sbjct 1223229 TACCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGG 1223288
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| || |||||||| || |||||| ||||||| | |||||| ||||| |
Sbjct 1223289 CCAAGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCGGGGG 1223348
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || |||||||||||| || || ||||| | |||| |||||| | | || |
Sbjct 1223349 GGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGATTCAA 1223408
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || ||||| || || ||||| || || ||||||||
Sbjct 1223409 CCTCTAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 1223457
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || ||||||||||| ||| | || || |||||| |||||
Sbjct 26900832 GTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCCAGCTG 26900891
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| ||||||||||||||||||| || || |||||||||||||| ||| ||
Sbjct 26900892 CTTTCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGAATCTT 26900951
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | ||||||| || ||||||| ||| | ||| || || ||
Sbjct 26900952 GGCCTTCACGTTGTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTCCCCGT 26901011
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || ||||||||
Sbjct 26901012 CAGCGTCTTCACGAAGATCTGCAT 26901035
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || ||||||||||| ||| | ||||| |||||||||||
Sbjct 4857972 GTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTG 4857913
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || ||||||| | ||||| || || || |||||||||||||| || ||
Sbjct 4857912 CTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 4857853
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| |||||| | ||| |||||||| | ||| | || || |||||
Sbjct 4857852 GGCCTTAACATTGTCGATGGTGTCAGAGCTTTCGACCTCCAAGGTTATGGTCTTCCCGGT 4857793
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||||||
Sbjct 4857792 GAGGGTCTTCACAAAGATCTGCAT 4857769
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || ||||| ||||||||| || ||||| |||||
Sbjct 1222077 CACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTGCGACCGTCCTC 1222136
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || ||||| |||| || | |||||| || || || || |||||||||||
Sbjct 1222137 GAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTG 1222196
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| ||||| | |||| ||||| | |||||| ||||| | ||| | || ||
Sbjct 1222197 GATCTTTGCCTTAACGTTGTCGATCGTGTCAGAGCTCTCAACCTCCAGGGTGATGGTCTT 1222256
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 1222257 TCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||||| |||||||||||
Sbjct 32122435 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTG 32122376
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| ||||||| | |||||| || || || || || |||||||| || ||
Sbjct 32122375 CTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTT 32122316
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| | ||| ||||||| ||| | || || || ||
Sbjct 32122315 GGCCTTGACGTTATCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGT 32122256
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 32122255 AAGGGTCTTCACGAAGATCTGCAT 32122232
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || |||| | | ||| | ||||| || ||||| || |||||||| || |||
Sbjct 1222514 TACCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGG 1222573
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||||||||| || || ||| |||| || | ||| || || ||||
Sbjct 1222574 CCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGTTGGTCCGGAG 1222633
Query 118630 GTATGCCCTCCTTGTC 118645
| ||||||||||||||
Sbjct 1222634 GGATGCCCTCCTTGTC 1222649
>seq5
Length=29377369
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || || || || |||||| |||| ||| || |||||| |||||||
Sbjct 457964 ACCAGGTGAAGAGTGGATTCCTTCTGAATGCTGTAGTCGTCCAGAGTGCGGCCATCCTCG 457905
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || ||||||| | ||||||||| || | ||||||||||||||
Sbjct 457904 AGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGATCCGGTGAGATGCCCTCCTTGTCATGG 457845
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| ||| ||||| | ||| ||||| | |||||| ||||| | ||| | || ||
Sbjct 457844 ATCTTTGCTTTAAGATTGGCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGATGGTGTTT 457785
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| |||||||| |||||
Sbjct 457784 CCGGTGAGGGTTTTGACAAAAATTTGCAT 457756
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || | ||||| ||||| || | ||||| || || || ||| |||||||
Sbjct 457751 CCCCCCCGGAGTCTCATTACCAAATGAAGGGTAGATTCCTTGTGGATGGAGTAATCGGCT 457692
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || | || || || || ||||||| | ||||| || |||
Sbjct 457691 AAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCCACAGGG 457632
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||||||| || || || || | |||| |||||||| ||||||||||
Sbjct 457631 ATACCCTCCTTGTCTTGCATCTTAGCCTTCACATTCTCGATGGTGTCCGAGCTCTCGACC 457572
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||| ||| ||||||||||| || || || | || || ||||||
Sbjct 457571 TCGAGGGTGGTGGTTTTGCCGGTAAGGGTCTTGATGAAGATTTGCATG 457524
>seq9
Length=34148863
Score = 131 bits (144), Expect = 1e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| ||||| | | | ||||| ||| | || || || || ||||||||||||||
Sbjct 33541436 ACCACCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 33541377
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||||| ||||| ||||| || |||||| ||||||| | ||||||||| || ||
Sbjct 33541376 CAGGGTGCGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGTGG 33541317
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| ||||||| |||||| ||
Sbjct 33541316 AATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCCAC 33541257
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| | ||| | || || ||||| || || || ||||| ||||||||| ||
Sbjct 33541256 CTCCAAGGTAATGGTCTTCCCGGTGAGGGTCTTAACAAAGATCTGCATGCCT 33541205
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582
||||| ||| | ||| | |||||||| || |||||||||||||| || |||||
Sbjct 33549208 TCTCAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGGCC 33549267
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
|||||| ||||| || ||||| ||||||| | ||||| || || || || ||||||||
Sbjct 33549268 ATCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCCGGGGGAATACCCTCCTT 33549327
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
||| ||| || || || | |||| |||||||| |||||| ||||| | ||| |
Sbjct 33549328 GTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAGCTCTCCACCTCAAGGGTGAT 33549387
Query 118703 CGTTTTGCCGGTCAGAG 118719
|| || ||||||| ||
Sbjct 33549388 GGTCTTCCCGGTCAAAG 33549404
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| ||||| | | | ||||| ||| | || || || || ||||||||||||||
Sbjct 33548968 ACCCCCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 33549027
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| |||||| ||||| ||||| || ||||| |||| || | ||||||||| || ||
Sbjct 33549028 CAGGGTGCGCCCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGG 33549087
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || ||| || || | || | ||||||| ||||| ||
Sbjct 33549088 AATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAATCGTGTCCGAACTCTCCAC 33549147
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| | ||| | || || || || || || || ||||| |||||||||
Sbjct 33549148 CTCCAAGGTAATGGTCTTCCCTGTGAGCGTCTTAACAAAGATCTGCATG 33549196
>seq4576
Length=2771
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || |||||||| || |||||||| || | || || ||||||||||||
Sbjct 2694 GTGGAGCGTCGACTCTTTCTGGATGTTGTAGTCCGCAAGCGTACGGCCATCCTCGAGCTG 2635
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| | ||||| | ||||| |||||||| |||||||| ||||| || ||
Sbjct 2634 CTTGCCCGCGAAAATGAGCCTTTGCTGGTCGGGAGGGATGCCCTCTTTGTCCTGGATCTT 2575
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | |||| |||||| | ||| |||||||||| ||| | ||||| || ||
Sbjct 2574 AGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTTTTTCCAGT 2515
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||||||
Sbjct 2514 GAGCGTCTTAACAAAGATCTGCAT 2491
>seq11
Length=25514024
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | ||| || ||||||||||| || ||
Sbjct 16241445 GTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCCC 16241504
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| ||||||| | ||||| || || || ||||| |||||||| ||| || ||
Sbjct 16241505 GCAAAGATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTC 16241564
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||||| ||||||||| |||| ||| | ||| || ||||| || ||
Sbjct 16241565 ACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGGGTGATCGTCTTCCCGGTGAGCGTC 16241624
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 16241625 TTCACAAAGATCTGCAT 16241641
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| |||||||| || || ||||| || ||| | ||||| |||||
Sbjct 15140728 CACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCGTCCTC 15140787
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 15140788 CAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 15140847
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||||| ||| ||||| | ||| | ||| ||
Sbjct 15140848 GATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCACCTCAAGGGTGATCGTCTT 15140907
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||| || || || ||||||||
Sbjct 15140908 CCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937
>seq3
Length=30470407
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || || ||||| || | |||||| ||||||||||||
Sbjct 5990998 GTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGCCCATCCTCGAGCTG 5991057
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || ||||||| |||||||| || || || ||||||||||| || || ||
Sbjct 5991058 CTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGGATCTT 5991117
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||||| ||| ||||||| ||| | ||| || || ||
Sbjct 5991118 GGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGT 5991177
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || ||||||||
Sbjct 5991178 GAGAGTCTTCACGAAGATCTGCAT 5991201
>seq1007
Length=1704909
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||||| |||||||||||
Sbjct 32324 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTG 32383
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| ||||||| |||||||| || |||| || || |||||||| || ||
Sbjct 32384 CTTCCCGGCGAAGATGAGCCGCTGCTGGTCCTGAGGAATCCCTTCCTTGTCCTGGATCTT 32443
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| || ||||| ||| ||||||| ||| | ||| || |||||
Sbjct 32444 GGCCTTGACGTTGTCGATGGCGTCCGATGACTCCACCTCGAGGGTAATCGTCTTCCCGGT 32503
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 32504 GAGGGTCTTCACGAAGATCTGCAT 32527
>seq6
Length=34899179
Score = 107 bits (118), Expect = 2e-18
Identities = 140/191 (73%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| ||||||||||| ||||| || || || || || || || || ||||| |
Sbjct 13154530 CTCAGCACCAAGTGGAGGGTAGATTCCTTCTGGATATTATAGTCAGCCAAGGTGCGGCCA 13154471
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| | || || ||||| ||||||| | |||||| || ||||| ||||||||||||
Sbjct 13154470 TCCTCCAATTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTG 13154411
Query 118644 T-CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
| |||| || ||| || || | |||| ||||||| |||||| ||||| | ||| |
Sbjct 13154410 TCCTGT-ATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCAAGGGTGAT 13154352
Query 118703 CGTTTTGCCGG 118713
|| || ||||
Sbjct 13154351 GGTCTTACCGG 13154341
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || || || || || ||||| || || || |||||| |||||||
Sbjct 13154752 ACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGTGTGCGCCCATCCTCG 13154693
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648
||||| || || || |||| || | ||| || || || || || |||||||||| ||||
Sbjct 13154692 AGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGGGATTCCCTCCTTGTCCTGT 13154633
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| || || | |||| ||||||| |||||| ||||| | || | || ||
Sbjct 13154632 -ATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCCAGAGTGATGGTCTT 13154574
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| |||||||| |||||
Sbjct 13154573 CCCCGTGAGGGTTTTCACAAAAATTTGCAT 13154544
>seq1
Length=27573629
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| || | |||||| |||||||||||
Sbjct 19376119 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGCCCGTCCTCGAGCTG 19376178
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || | ||||| |||||||| || || || || ||||||||||| || ||
Sbjct 19376179 CTTCCCGGCAAATATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTT 19376238
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||||| ||| ||||||| ||| | ||| || |||||
Sbjct 19376239 CGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 19376298
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 19376299 GAGGGTCTTCACGAAGATCTGCAT 19376322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433792019431228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |