Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq10 98.7 1e-15
seq4 98.7 1e-15
>seq10
Length=33665772
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/182 (69%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||| || || | ||| || | | ||| ||||||||||| |||||||| || || |||
Sbjct 14516066 ATATTGTAGTCCGCAAGGGTGCGACCATCCTCTAATTGTTTCCCAGCAAAGATTAACCTT 14516125
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215
||||| ||||| ||||| || ||||||||||| ||||
Sbjct 14516126 TGCTGGTCCGGTGGAATACCCTCTTTATCTTGAATTTTAGCTTTCACATTATCAATAGTA 14516185
Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275
|| ||| ||| ||||| || ||||| || || || || | || |||||||||||||||
Sbjct 14516186 TCGGAAGATTCAACTTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTAATGAATATTTGC 14516245
Query 146276 AT 146277
||
Sbjct 14516246 AT 14516247
>seq4
Length=30051516
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| ||| || | |||| ||| | || || ||||| || || || ||||
Sbjct 3354433 TTCCACCCTGAAGCCTCAGAACCAGATGAAGTGTCGACTCTTTCTGGATGTTGTAGTCTG 3354374
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||||||||| ||| || ||||| || ||||||||||||||||| ||||||||||| |
Sbjct 3354373 CAAGAGTTCTGCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTCTGCTGATCCGGGG 3354314
Query 146169 GAATTCCTTCTTTATCTTG 146187
||||| || || || ||
Sbjct 3354313 CTATTCCCTCCTTGTCCTG 3354295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743458934273280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |