Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq8 132 3e-26
seq11 125 5e-24
seq4576 122 6e-23
seq1007 105 4e-18
seq9 104 2e-17
seq6 98.7 6e-16
seq3 91.5 1e-13
seq1 89.7 3e-13
seq2973 86.0 4e-12
>seq8
Length=35439739
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| |||| || || ||||| | || || ||||| |||||||||||||
Sbjct 4857995 CCACCGCGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 4857936
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| |||| || | |||||||||||| || ||||||| |||||||| |||
Sbjct 4857935 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGGGGG 4857876
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | || | ||||||
Sbjct 4857875 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCTTTCGACC 4857816
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| || ||||| || |||||||| || ||||||||||||||||||
Sbjct 4857815 TCCAAGGTTATGGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCATC 4857768
Score = 131 bits (144), Expect = 1e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236
||||| ||||| | || || ||||| ||||| ||||||| || | || ||| ||||
Sbjct 1223246 AGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTG-CGGCCGTC 1223304
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|| | |||||| || ||||| ||||||| |||||||||| ||| | | |||||||||
Sbjct 1223305 TTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTGTC 1223364
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | || | | || | |||| ||||| || || | ||||||||
Sbjct 1223365 TTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTGATGGT 1223424
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| ||||| |||||||| ||||||||||||
Sbjct 1223425 CTTGCCAGTGAGGGTTTTCACGAAGATCTGCATC 1223458
Score = 122 bits (134), Expect = 6e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AGCTGACG 34230
|| ||||||||||| || | || || ||||| ||||| ||||||| | || || ||
Sbjct 1222297 AGTCTCAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTG-CG 1222355
Query 34231 GTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTC 34290
| | || || | ||||||||| || || ||||||| ||||||||| || | || |||
Sbjct 1222356 GCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCCTC 1222415
Query 34291 CTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350
|||||| ||||| ||| | | | | |||| || | ||||| || | ||
Sbjct 1222416 CTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTCGACCTCGAGGGT 1222475
Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||| |||||||||||||| |||||||||||||||||
Sbjct 1222476 GATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 1222514
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | || || ||||| | || || ||||| |||||||||||||
Sbjct 26900809 CCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGCG 26900868
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
|| ||| | || |||| |||||| || ||||| ||||| |||||||| | || ||||
Sbjct 26900869 AGGGTTCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 26900928
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | | | | |||| || | |||||| ||
Sbjct 26900929 -ATGCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATCGTGTCCGACGATTCCAC 26900987
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || || || || ||||| ||||||||||||
Sbjct 26900988 CTCGAGGGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATC 26901036
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
|||||||||||||| || | || || ||||| |||||||| |||| || |||
Sbjct 4858214 AGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGAGTGCGG 4858155
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGGCACGCTCTC 34290
|||| || | ||| |||||||| || ||||||| ||||||| || |||| | || |||
Sbjct 4858154 CCGTCTTCGAGCTGTTTGCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGG-ATGCCCTC 4858096
Query 34291 CTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350
|||||| ||||| ||| | | | | || | || | ||||| |||| ||
Sbjct 4858095 CTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAGCTCTCGACCTCCAAGGT 4858036
Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || || |||||||| ||||| |||||||||||
Sbjct 4858035 AATGGTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCAT 4857997
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | || || ||||| | || || ||||| |||||||||||||
Sbjct 32122458 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 32122399
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
|| ||| |||| || | |||||| || ||||| ||||||| |||||||| || ||||
Sbjct 32122398 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGG 32122339
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||||| ||| | | | |||| || | || || ||
Sbjct 32122338 ATCCCT-TCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATCGTGTCCGAGGACTCCAC 32122280
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || || || || ||||| ||||||||||||
Sbjct 32122279 CTCGAGGGTGATTGTCTTCCCCGTAAGGGTCTTCACGAAGATCTGCATC 32122231
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| || ||||| |||| ||| || ||||
Sbjct 1222075 AGCACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTGCGACCGTCC 1222134
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || || |||| ||||||||| || | | |||||||||
Sbjct 1222135 TCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCC 1222194
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | | | | |||| || | || || |||| ||||||||
Sbjct 1222195 TGGATCTTTGCCTTAACGTTGTCGATCGTGTCAGAGCTCTCAACCTCCAGGGTGATGGTC 1222254
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || ||||| || || || |||||||||||
Sbjct 1222255 TTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286
Score = 82.4 bits (90), Expect = 5e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || ||| ||||||||||||||||| | |
Sbjct 4859263 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCCGCC 4859204
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTG 34272
|| || |||| || | |||||| || ||||| ||||||| ||||||
Sbjct 4859203 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTG 4859154
>seq11
Length=25514024
Score = 125 bits (138), Expect = 5e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | ||| || ||||| ||||| |||||||
Sbjct 15140711 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCG 15140770
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
|| ||| |||| |||| |||||| || ||||| ||||| |||||||||| || ||||
Sbjct 15140771 AGGGTGCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 15140830
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | | | | |||| || | ||| || ||
Sbjct 15140831 -ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCAC 15140889
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || || || || | ||| ||||| |||||||||||
Sbjct 15140890 CTCAAGGGTGATCGTCTTCCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| || ||||| ||||||||||| | || |||| ||||
Sbjct 16241430 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCC 16241489
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || ||||||| |||||||| || | || ||||||||
Sbjct 16241490 TCGAGCTGCTTGCCCGCAAAGATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCC 16241549
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | ||||| || | ||||| ||
Sbjct 16241550 TGAATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGGGTGATCGTC 16241609
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| |||||||| || ||||||||||||||||||
Sbjct 16241610 TTCCCGGTGAGCGTCTTCACAAAGATCTGCATC 16241642
Score = 91.5 bits (100), Expect = 1e-13
Identities = 93/119 (78%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 34179 GCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238
|||| ||||| | ||| || ||||||||||||||||| | ||| |||| |||| |
Sbjct 19732793 GCACTAGGTGGAGAGTTGACTCCTTCTGTATGTTGTAGTCCGCAAGCGTACGGCCGTCCT 19732852
Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTC 34296
| | ||||||||||||||| ||||||| ||||||| || |||| | | |||||||||
Sbjct 19732853 CGAGCTGCTTGCCTGCGAAGATGAGCCTTTGCTGGTCCGGCGGG-ATCCCCTCCTTGTC 19732910
>seq4576
Length=2771
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || ||||| | || |||||||| ||||||||||| |
Sbjct 2717 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCTTTCTGGATGTTGTAGTCCGCA 2658
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| |||| | || || | ||||||||| ||||||||||||| ||||||||| ||
Sbjct 2657 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATGAGCCTTTGCTGGTCGGGAGGG 2598
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||| ||||| ||| || ||||| | | | | || | |||| ||||||
Sbjct 2597 ATGCCCTCTTTGTCCTGGATC-TTAGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGAC 2539
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||||||||| || ||||| || || |||||||||||||||
Sbjct 2538 CTCGAGGGTGATGGTTTTTCCAGTGAGCGTCTTAACAAAGATCTGCATC 2490
>seq1007
Length=1704909
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||||||||| | || || ||||| | || || ||||| |||||||||||||
Sbjct 32301 CCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 32360
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || ||||| ||||||||||||||||| ||
Sbjct 32361 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCTGAGGA 32420
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | | | | || | || | || || ||
Sbjct 32421 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGCGTCCGATGACTCCACC 32480
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || || || || |||||||| || ||||| ||||||||||||
Sbjct 32481 TCGAGGGTAATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATC 32528
>seq9
Length=34148863
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||||||| | || ||| ||||| |||||||| || | |
Sbjct 33541435 CCACCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 33541376
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || ||||| ||||||| |||||| || ||
Sbjct 33541375 AGGGTGCGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGA 33541316
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | |||| || | || ||
Sbjct 33541315 ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 33541256
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||| || |||||||| || || ||||||||||||||
Sbjct 33541255 TCCAAGGTAATGGTCTTCCCGGTGAGGGTCTTAACAAAGATCTGCAT 33541209
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||||||| | || ||| ||||| |||||||| || | |
Sbjct 33548969 CCCCCGCGGAGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 33549028
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| |||||| || || || || |||| |||||| || ||
Sbjct 33549029 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGA 33549088
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| |||||| ||| | || | |||| || | || ||
Sbjct 33549089 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAATCGTGTCCGAACTCTCCACC 33549148
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||| || || ||||| || || ||||||||||||||
Sbjct 33549149 TCCAAGGTAATGGTCTTCCCTGTGAGCGTCTTAACAAAGATCTGCAT 33549195
>seq6
Length=34899179
Score = 98.7 bits (108), Expect = 6e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || |||||||| | ||| ||| ||||| ||||| ||||| | |
Sbjct 13154770 CCACCGCGGAGACGAAGGACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGCC 13154711
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || || | |||||| || || || || |||| ||| ||||| ||
Sbjct 13154710 AGTGTGCGCCCATCCTCGAGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGGG 13154651
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||||| ||| | || | | || | || | || ||
Sbjct 13154650 ATTCCCTCCTTGTCCTGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACC 13154591
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394
|||| |||||||| || || ||||| ||||||||||| || |||||| |||
Sbjct 13154590 TCCAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATTTGCATCCCTC 13154539
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AGCTGACG 34230
||||||||||||| ||| | ||| ||| ||||| || || ||||| | | || || ||
Sbjct 13154533 AGCCTCAGCACCAAGTGGAGGGTAGATTCCTTCTGGATATTATAGTCAGCCAAGGTG-CG 13154475
Query 34231 GTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTC 34290
| | || ||||| |||||||| || || ||||||| ||||||||| || | || |||
Sbjct 13154474 GCCATCCTCCAATTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTC 13154415
Query 34291 CTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350
|||||| ||||||| ||| | || | | || | || | || || || | ||
Sbjct 13154414 CTTGTCCTGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTCTCAACCTCAAGGGT 13154355
Query 34351 GATGGTTTTGCCGG 34364
|||||| || ||||
Sbjct 13154354 GATGGTCTTACCGG 13154341
>seq3
Length=30470407
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | || || ||||| | || || ||||| || |||||||| |
Sbjct 5990975 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCG 5991034
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
|| || | || || | |||||| || || || ||||| ||||||||||| | ||||
Sbjct 5991035 AGGGTGCGCCCATCCTCGAGCTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGG 5991094
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||| || ||||| ||| | | | | || | || | ||| || ||
Sbjct 5991095 -ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCAC 5991153
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || |||||||| ||||| ||||||||||||
Sbjct 5991154 CTCGAGGGTGATCGTCTTCCCCGTGAGAGTCTTCACGAAGATCTGCATC 5991202
>seq1
Length=27573629
Score = 89.7 bits (98), Expect = 3e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || || |||| || | |||||| || || ||
Sbjct 19376132 TCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCAAAT 19376191
Query 34259 ATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||||| |||||||||| || |||| | | ||||||||| ||||| ||| | |
Sbjct 19376192 ATGAGGCGCTGCTGGTCCGGCGGG-ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 19376250
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | || | || || || || | ||||| || || |||||||| || |||||
Sbjct 19376251 GTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCAC 19376310
Query 34378 AAAGATCTGCATC 34390
||||||||||||
Sbjct 19376311 GAAGATCTGCATC 19376323
>seq2973
Length=40044
Score = 86.0 bits (94), Expect = 4e-12
Identities = 112/151 (74%), Gaps = 3/151 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||||| ||||| | ||| || ||||||||||||||||| |
Sbjct 14961 CCGCCACGGAGGCGGAGCACTAGGTGGAGAGTCGACTCCTTCTGTATGTTGTAGTCCGCA 14902
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
||| |||| |||| |||| ||| || || ||||| || |||| ||||||| || ||||
Sbjct 14901 AGCGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATTAGCCTTTGCTGGTCCGGCGGG 14842
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312
| | ||||||||| ||| ||||||||
Sbjct 14841 -ATCCCCTCCTTGTCTTGAATC-TTTGCTTT 14813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323043418123040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |