Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq5 87.8 1e-12
seq4 82.4 6e-11
>seq5
Length=29377369
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| ||||| ||||| | ||||| ||||| || ||||| || || ||| ||| |||||
Sbjct 457752 TCCCCCCCGGAGTCTCATTACCAAATGAAGGGTAGATTCCTTGTGGATGGAGTAATCGGC 457693
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | |||||||||||| ||||| ||| |||| || ||||| || ||||| ||
Sbjct 457692 TAAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCCACAGG 457633
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || ||||| || || | ||| || | | | ||||| | ||||
Sbjct 457632 GATACCCTCCTTGTCTTGCATCTTAGCCTTCACATTCTCGATGGTGTCCGAGCTCTCGAC 457573
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | |||| || |||||||||| | || || | || ||||||||
Sbjct 457572 CTCGAGGGTGGTGGTTTTGCCGGTAAGGGTCTTGATGAAGATTTGCAT 457525
>seq4
Length=30051516
Score = 82.4 bits (90), Expect = 6e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| ||| | || || || |||| |||||||| || ||||| || ||||||||||| ||
Sbjct 3354432 TCCACCCTGAAGCCTCAGAACCAGATGAAGTGTCGACTCTTTCTGGATGTTGTAGTCTGC 3354373
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCC 18212
| ||| | | |||||||||||| || || ||| | || | ||| || ||||||
Sbjct 3354372 AAGAGTTCTGCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTCTGCTGATCC 3354318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379310439791955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |