Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 7e-11 >seq2 Length=22054697 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20999 GACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAG 21058 ||| ||||| |||| | || | |||| ||| ||||||||||| || || ||||| Sbjct 16115921 GACTTGAGCAATCATGCATGTTAAAAGGGAGTATGATGCGATGTTAAATGGCACACCGAG 16115862 Query 21059 GCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAA 21118 |||| ||| ||||||| ||||||| ||||| ||||||||||| ||||||| || Sbjct 16115861 ACCCAAGTCTGCGGACCGTTGGTACATTTGGCATGACAGCTCCCCATTCTCCACGTAGAA 16115802 Query 21119 CTG 21121 ||| Sbjct 16115801 CTG 16115799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427738155058320