Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 167 3e-36
seq9 159 5e-34
>seq6
Length=34899179
Score = 167 bits (184), Expect = 3e-36
Identities = 394/582 (68%), Gaps = 11/582 (2%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||||||||||| || | || ||||| | ||||||||||| ||||||||| |
Sbjct 15336444 TGTTTCCCATCACCTACCCGTCAATCTGGGAGTTCTACAAAAAGGCCGTGGCCTCCTTCT 15336503
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||||| || ||||| || ||||| |||| || | | | ||| || |||| || | |
Sbjct 15336504 GGACGGCGGAGGAGGTGGACTTGTCCCAGGATCTCTCCCACTGGCAGGATCGTCTGTCCG 15336563
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
|||| | || || || || | | ||||| ||||||| |||||| || ||||
Sbjct 15336564 CCGACGAGCACCACTTCATCTCCCATGTCCTCGCCTTTTTTGCCGCCTCCGACGGCATCG 15336623
Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGC 125234
|| ||| || ||| | | || ||| | || || | | |||| |||| || ||
Sbjct 15336624 TCCTCGAGAACCTGGCGGCCCGGTTCATGCGCGACGTCCAGC-TTCCTGAGGCC-CGCGC 15336681
Query 125235 TTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
|| ||||| ||||| ||| || |||||| | ||||| || ||||| ||| || |
Sbjct 15336682 CTTCTACGGCTTCCAGATCGCTATCGAGAACATCCACTCTGAGATGTATTCTCTCCTCCT 15336741
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGG 125352
|||| ||||| || || | || || | || |||| | || || ||||| |
Sbjct 15336742 CGACACCTACATCAAGGACCC-CGGCGAGAAGTCTCGCCTCTTCCATGCCATTGACACCG 15336800
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412
| || || | ||||| | |||| | | || |||||||| | ||||
Sbjct 15336801 TCCCTCCTGTCGCCCGCAAGGCCGAGTGGGCGCTACGCTGGATCGAATCCTCT--GTCT- 15336857
Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGT 125471
| | |||||| | || || || |||||| ||| ||||| ||||||| || || | |
Sbjct 15336858 CATTCGCCGAGCGCCTCGTTGCCTTCGCCTGCGTCGAGGGAGTCTTCTTCTCCGGCTCCT 15336917
Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531
| |||| ||||||| |||||||||||||| || |||||||| || || || | |||
Sbjct 15336918 TCTGCG-CCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGTCTCACCTTCTCAAAC 15336976
Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573
||| | || || || ||||||||||| ||||| ||||| |||
Sbjct 15336977 GAGCTCATCTCCCGTGACGAGGGCCTCCACTGCGACTTCGCC 15337018
Score = 161 bits (178), Expect = 1e-34
Identities = 395/585 (68%), Gaps = 19/585 (3%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| |||| || | ||| ||||| | ||||| ||||| ||||||||| |
Sbjct 4328162 TGTTTCCTATCACCTACCCCTCCATCTGGGAGTTCTACAAGAAGGCGGTGGCCTCCTTCT 4328221
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | || ||||| || ||||| |||||| | | | ||| || || | | |
Sbjct 4328222 GGACCGCAGAGGAGGTGGACCTGTCGCCGGACCTCTCCCAGTGGCAGCACCGCCTCTCCG 4328281
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||||| | || | || ||| | | ||||| ||||||| |||||| || ||||
Sbjct 4328282 ACGACGAGCGCCACTTCGTCTCCCACGTCCTCGCCTTTTTTGCCGCCTCCGACGGCATCG 4328341
Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGC 125234
|| ||| || ||| | || ||| | || || | | | || |||| || ||
Sbjct 4328342 TCCTCGAGAACCTGGCCGCCCGCTTCATGCGCGACGTCCAAC-TCCCCGAGGCC-CGCGC 4328399
Query 125235 TTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
|| ||||| ||||| || || |||||| | ||||| || |||||||| || |
Sbjct 4328400 CTTCTACGGTTTCCAGATTGCAATCGAGAACATCCACTCCGAGATGTACTCCCTTCTACT 4328459
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGG 125352
|| | |||||| || || | |||| || || |||| |||| |||||||| |
Sbjct 4328460 CGATACGTACATCAAGGACCC-CGACGTGAAGTTTCGCCTCTTCCACGCGATCGACACCG 4328518
Query 125353 T----GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408
| |||||| | ||||| |||||| | | ||||| || | | | |
Sbjct 4328519 TCCCTGCCGTCGCCCGG----AAGGCCGAATGGGCTCTCCAATGGATTGA-GTCTTCCGG 4328573
Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTT-TTCGGG 125467
|| | |||||| |||| || || |||||| ||| ||||||||||| || | |||
Sbjct 4328574 C--TCCTTCGCCGAGCGACTCGTCGCCTTCGCCTGCGTCGAGGGCATCTTTTTCTCCGGC 4328631
Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527
| || ||| |||||||| ||||||||||||||||| ||||||||||| || || |
Sbjct 4328632 TCCTTCTGC-GCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTCACCTTCTC 4328690
Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
|||||| | || || || ||||||||||| ||||| ||||||||
Sbjct 4328691 CAACGAGCTCATCTCCCGTGACGAGGGCCTTCACTGCGACTTTGC 4328735
>seq9
Length=34148863
Score = 159 bits (176), Expect = 5e-34
Identities = 393/585 (67%), Gaps = 17/585 (3%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| ||||||| || | | ||| ||||| | ||||| ||||| ||||||||| |
Sbjct 1096416 TGTTCCCCATCACTTACCCTTCCATCTGGGAGTTCTACAAGAAGGCGGTGGCCTCCTTCT 1096475
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||||| || ||||| |||||||| |||| | | ||||| || ||| | |
Sbjct 1096476 GGACGGCGGAGGAGGTGGATCTGTCTCCGGACGTACCCCATTGGCAGCATCGCCTCTCCC 1096535
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||||| | || || || ||| || | |||||||| |||| ||| || || ||||
Sbjct 1096536 ACGACGAGCGCCACTTCATCTCCCACGTTCTTGCCTTCTTCGCCGCCTCAGACGGCATCG 1096595
Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGC 125234
|| || || || | || ||| | || || | | | || |||| ||| ||
Sbjct 1096596 TCCTTGAGAACCTCGCCGCCCGGTTCATGCGCGACGTCCAGC-TCCCCGAGGC-TCGCGC 1096653
Query 125235 TTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
|| ||||| ||||| ||| || |||||| | ||||| || |||||||| || |
Sbjct 1096654 CTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCTGAGATGTACTCCCTCCTCCT 1096713
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGG 125352
|||| ||||| || || | || || || | ||||| || ||||| ||||
Sbjct 1096714 CGACACCTACATCAAGGACCCTGA-CGAGAAGACCCGTCTCTTCCGAGCCATCGAGACGG 1096772
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGA---TGACGACAAGT 125409
| || ||| | |||||| | |||| | || ||||| || | || |
Sbjct 1096773 TCCCCTCTGTCGCCCGAAAGGCCGACTGGGCCCTGCGCTGGATTGAATCTTCCGGC---- 1096828
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-T 125468
|||| ||||| || | || || |||||| || ||||| |||||||| || || |
Sbjct 1096829 --TCGTTTGCCGAGCGAATTGTCGCCTTCGCCTGTGTCGAGGGAATCTTCTTCTCTGGCT 1096886
Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
|| |||| | ||||||||||||||||||||||| |||||||| || || || |
Sbjct 1096887 CCTTCTGCG-CTATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCGGGGCTCACCTTCTCG 1096945
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573
|||||| |||| || || ||||||||||| || || ||||| |||
Sbjct 1096946 AACGAGCTTATCTCCCGTGACGAGGGCCTTCATTGCGACTTCGCC 1096990
Score = 150 bits (166), Expect = 3e-31
Identities = 381/564 (68%), Gaps = 19/564 (3%)
Strand=Plus/Plus
Query 125018 CATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCT 125077
||| ||||| | ||||| ||||| |||||| || ||||||| || ||||| || ||
Sbjct 33079009 CATCTGGGAGTTCTACAAGAAGGCGGTGGCCTCGTTCTGGACGGCGGAGGAGGTGGACCT 33079068
Query 125078 GTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||| |||||| | | | ||| | ||| | || ||||| ||| | ||
Sbjct 33079069 GTCGCCGGACCTCTCCCACTGGCAACACCGTCTCACCCCCGACGAGCGCCGCTTTGTCTC 33079128
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
||| | | |||||||| |||| ||||||||| ||||||| ||| || || | ||
Sbjct 33079129 CCACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCATCGAGAACCTCGCCGCGCG 33079188
Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATG 125255
||| | || || | | | || |||| || || || ||||| ||||| |||
Sbjct 33079189 CTTCATGCGCGACGTCCAGC-TCCCCGAGGCC-CGCGCCTTCTACGGCTTCCAGATCGCC 33079246
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315
|| |||||| | ||||| || |||||||| || | |||| ||| | || ||
Sbjct 33079247 ATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGACACCTACGTCAAGGACCC- 33079305
Query 125316 CAACGTAAACACATGC-TCTTTAACGCAATCGACACGGT----GCCGTCTATACGTAAAA 125370
| ||| || || |||| |||| ||||| || || |||||| || ||
Sbjct 33079306 CGACGACAAGTATCGCCTCTTCCACGCCATCGATACCGTCCCCGCCGTCGCC-CG---AA 33079361
Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430
|||| | |||| |||| ||||||||| | | | || | | |||||| | || |
Sbjct 33079362 AGGCCGACTGGGCCCTTCGCTGGATCGATTCCTCC--GGCTCCTT-CGCCGAGCGCCTCG 33079418
Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTT-TTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
| || |||||| ||| |||||||||||||| | ||| | || ||| || ||||| |||
Sbjct 33079419 TTGCCTTCGCCTGCGTCGAGGGCATCTTCTTCTCCGGTTCCTTCTGC-GCTATCTTCTGG 33079477
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
|||||||| ||||| ||||||||||| || || | ||||| | || || || |||
Sbjct 33079478 CTCAAGAAACGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAACTCATCTCCCGCGAC 33079537
Query 125550 GAGGGCCTACACTGTGACTTTGCC 125573
|||||||| ||||| ||||| |||
Sbjct 33079538 GAGGGCCTCCACTGCGACTTCGCC 33079561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740991958140840
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