Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 9e-14 >seq6 Length=34899179 Score = 91.5 bits (100), Expect = 9e-14 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTT-GGTCATCC---AATTGCTT 33228 || ||||| ||||| || ||||| |||| ||| | || || ||||| | |||||| Sbjct 13144359 GTGGACTCCTTTTGGATGTTGTAGTCAG-CAA---GGGTGCGGCCATCCTCAAGTTGCTT 13144304 Query 33229 TCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTG 33288 ||| |||||| || | ||||||||||| |||||| || || || || ||| Sbjct 13144303 GCCAGCAAATATCAACCTTTGCTGGTCCGGGGGTATTCCCTCCTTATCCTGGATCTTGGC 13144244 Query 33289 TTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAG 33348 ||| || | | ||| ||||| || || ||| || || || ||||| ||||| || || Sbjct 13144243 TTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCAAGGGTGATCGTCTTTCCAGTGAG 13144184 Query 33349 AGTTTTTACGAAAATTTGCAT 33369 |||||| || || |||||||| Sbjct 13144183 AGTTTTGACAAAGATTTGCAT 13144163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318749398044582