Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq10 98.7 7e-16
>seq10
Length=33665772
Score = 98.7 bits (108), Expect = 7e-16
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || |||||||| || ||||| || |||| |||||||||| | || | ||| ||||
Sbjct 14516091 CATCCTCTAATTGTTTCCCAGCAAAGATTAACCTTTGCTGGTCCGGTGGAATACCCTCTT 14516150
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
||||| |||||| ||| || || ||| |||||| | | || || || | || |
Sbjct 14516151 TATCTTGAATTTTAGCTTTCACATTATCAATAGTATCGGAAGATTCAACTTCAAGGGTGA 14516210
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || || ||||| | |||||| | |||||||||||
Sbjct 14516211 TGGTCTTGCCGGTGAGAGTCTTAATGAATATTTGCAT 14516247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354746213158332
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