Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 4e-14
>seq4
Length=30051516
Score = 93.3 bits (102), Expect = 4e-14
Identities = 118/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643
|||| |||||||||||| || || |||||| ||| ||||||||||| | |||
Sbjct 10863489 CTCGATGATCAGCTGCGCAATCCGATCGCCCTCCTTCACCTCGAAATCTACATCCGAGAA 10863548
Query 5644 GTTGAACAGCACCACGCCCACGTTG-CCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCA 5702
|||||||| || ||||||| || | || | ||| || || || |||||||| || ||||
Sbjct 10863549 ATTGAACAGAACGACGCCCA-GTGGCCCTCTGTAATCCGCATCGATCACGCCTGCTCCCA 10863607
Query 5703 CGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742
|||| || ||||||| || | ||||| || |||||
Sbjct 10863608 CGTCAATCGAGTGCTTCCAAGCTAATCCGGACCGAGGAGC 10863647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430016353490408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |