Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=30051516 Score = 93.3 bits (102), Expect = 4e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||| |||||||||||| || || |||||| ||| ||||||||||| | ||| Sbjct 10863489 CTCGATGATCAGCTGCGCAATCCGATCGCCCTCCTTCACCTCGAAATCTACATCCGAGAA 10863548 Query 5644 GTTGAACAGCACCACGCCCACGTTG-CCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCA 5702 |||||||| || ||||||| || | || | ||| || || || |||||||| || |||| Sbjct 10863549 ATTGAACAGAACGACGCCCA-GTGGCCCTCTGTAATCCGCATCGATCACGCCTGCTCCCA 10863607 Query 5703 CGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 |||| || ||||||| || | ||||| || ||||| Sbjct 10863608 CGTCAATCGAGTGCTTCCAAGCTAATCCGGACCGAGGAGC 10863647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430016353490408