Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4576 111 2e-19 seq8 86.0 6e-12 >seq4576 Length=2771 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||||||| | |||||| |||| | ||| | Sbjct 2491 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTCGAAAGCTCC 2550 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | |||||| ||||| |||||||| || || |||||||| || Sbjct 2551 GACACCATCGACAACGTCAAAGCTAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAG 2610 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||||| ||||||| || ||||| || ||||| |||| | ||| || ||||| || Sbjct 2611 CAAAGGCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCCG-TACGCTTGCGGACTACAA 2669 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| || ||||| || || |||| || ||||| Sbjct 2670 CATCCAGAAAGAGTCGACGCTCCACCTCGTCCT 2702 >seq8 Length=35439739 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| ||||| || || || ||||| || || Sbjct 1222454 GACACGATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 1222395 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||| | | |||||| || ||||| |||| | | | | |||||||||| Sbjct 1222394 CAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAAC 1222335 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || || || | |||||||| |||||||| || ||||| Sbjct 1222334 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 1222288 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | ||||| || | |||||| | || | ||||| | Sbjct 1223457 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTAGAGGTTGAATCCTCC 1223398 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || ||||| || ||||| || Sbjct 1223397 GACACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCCGACCAG 1223338 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||| | || || || || |||||||| | | | | | |||||||||| Sbjct 1223337 CAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTATAAC 1223278 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || |||| || || || Sbjct 1223277 ATTCAGAAGGAGTCCACCCTCCACCTCGTGCT 1223246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478618967370480