Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq4576 107 2e-18
seq8 95.1 1e-14
>seq4576
Length=2771
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | ||||||||| | || ||| |||| ||||| | |
Sbjct 2491 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTCGAAAGCTCC 2550
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | |||||| ||||| |||||||| ||||| |||||||| ||
Sbjct 2551 GACACCATCGACAACGTCAAAGCTAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAG 2610
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| || || |||| || |||||||| ||||| |||| | | ||| || || || ||
Sbjct 2611 CAAAGGCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCCG-TACGCTTGCGGACTACAA 2669
Query 24170 CATTCAAAAAGAATCTAC 24187
||| || ||||| || ||
Sbjct 2670 CATCCAGAAAGAGTCGAC 2687
>seq8
Length=35439739
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | || || || | || ||| |||| |||||| |
Sbjct 1222514 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 1222455
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || || ||||| ||||| || ||||| ||||| || ||
Sbjct 1222454 GACACGATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 1222395
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | | ||||||||| ||||| |||| | | | | | ||| ||||||
Sbjct 1222394 CAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAAC 1222335
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || || || || ||||| | ||| | ||| | || |||||
Sbjct 1222334 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 1222288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429897963965145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |