Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4576 107 2e-18 seq8 95.1 1e-14 >seq4576 Length=2771 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||||||| | || ||| |||| ||||| | | Sbjct 2491 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTCGAAAGCTCC 2550 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| ||||| |||||||| ||||| |||||||| || Sbjct 2551 GACACCATCGACAACGTCAAAGCTAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAG 2610 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || || || |||| || |||||||| ||||| |||| | | ||| || || || || Sbjct 2611 CAAAGGCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCCG-TACGCTTGCGGACTACAA 2669 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 2670 CATCCAGAAAGAGTCGAC 2687 >seq8 Length=35439739 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| |||| |||||| | Sbjct 1222514 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 1222455 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||| || ||||| ||||| || || Sbjct 1222454 GACACGATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 1222395 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | ||||||||| ||||| |||| | | | | | ||| |||||| Sbjct 1222394 CAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAAC 1222335 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || ||||| | ||| | ||| | || ||||| Sbjct 1222334 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 1222288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429897963965145