Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq8 84.2 2e-11
>seq8
Length=35439739
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || ||||| || || ||||| ||| |||| ||| |
Sbjct 1222514 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 1222455
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | ||||| || || || || || || || ||| |||| || ||
Sbjct 1222454 GACAC-GATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 1222396
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || || | ||| ||||| || | || |||| | ||| ||||||| |||||
Sbjct 1222395 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTATAA 1222336
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||| || ||||| || | ||| ||||| ||||| | | |||||
Sbjct 1222335 CATTCAGAAGGAGTCCACCCTTCATCTGGTGCTGAGACTCAGGGGAGG 1222288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425306370215080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |