Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 5e-11 >seq9 Length=34148863 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || ||||||||||| || | | | |||| || | || Sbjct 33548993 TGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGCCCGTCCTCCAGCTGC 33549052 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || ||||| | |||| | ||| || || |||||| || |||||||| || ||| Sbjct 33549053 TTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCCTGGATCTTT 33549112 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || ||| | || || || || | | || || || ||||||||||| || ||||| Sbjct 33549113 GC-CTTGACATTATCAATCGTGTCCGAACTCTCCACCTCCAAGGTAATGGTCTTCCCTGT 33549171 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||| Sbjct 33549172 GAGCGTCTTAACAAAGATCTGCAT 33549195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357360381864815