Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq11 140 4e-28 seq1 131 2e-25 seq3 129 7e-25 seq8 123 3e-23 seq4576 107 2e-18 seq6 104 3e-17 seq9 102 9e-17 seq1007 98.7 1e-15 seq2 93.3 5e-14 >seq11 Length=25514024 Score = 140 bits (154), Expect = 4e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| ||||| || ||||||| || ||||| |||| || Sbjct 15140728 CACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCGTCCTC 15140787 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| || | |||||||||||| | ||| | || |||||||||| Sbjct 15140788 CAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 15140847 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | |||||| ||| ||||| || | ||||| || | Sbjct 15140848 GATCTTCGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCCACCTCAAGGGTGATCGTCT 15140906 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||||| || || || ||||| ||||| Sbjct 15140907 TCCCCGTCAAAGTCTTCACGAAGATCTGCAT 15140937 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | ||||| || |||| |||||||||||||| || || Sbjct 16241450 CTCCTTCTGGATGTTGTAGTCTGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCCCGCAAA 16241509 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | |||||||| | || | || ||||||||| ||||| ||| | ||| Sbjct 16241510 GATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCA-CGT 16241568 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| || || || | ||||| || || || || ||||| | Sbjct 16241569 TGTCGATGGTGTCCGAGCTC---TCGACTTCGAGGGTGATCGTCTTCCCGGTGAGCGTCT 16241625 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||| ||||| Sbjct 16241626 TCACAAAGATCTGCAT 16241641 >seq1 Length=27573629 Score = 131 bits (144), Expect = 2e-25 Identities = 148/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || |||||| |||| ||||||||||| ||||| || Sbjct 19376131 CTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCAAA 19376190 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||| | |||||||||||| | ||| | | |||||||||| ||||||| ||||| ||| Sbjct 19376191 TATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 19376249 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| || | ||||| || || || || || || || | Sbjct 19376250 TGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCA 19376309 Query 46581 CAAAGATTTGCATTTT 46596 | ||||| ||||| || Sbjct 19376310 CGAAGATCTGCATCTT 19376325 >seq3 Length=30470407 Score = 129 bits (142), Expect = 7e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| | || |||||| | || ||||||||||| ||||| || Sbjct 5991010 CTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGCCCATCCTCGAGCTGCTTCCCGGCAAA 5991069 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | ||| | || |||||| ||| |||||| ||| | ||| Sbjct 5991070 GATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCA-CGT 5991128 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| ||| ||||| || | ||||| || || ||||| || || || | Sbjct 5991129 TGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGTGAGAGTCTTCA 5991188 Query 46581 CAAAGATTTGCATTTTGC 46598 | ||||| ||||| |||| Sbjct 5991189 CGAAGATCTGCATCTTGC 5991206 >seq8 Length=35439739 Score = 123 bits (136), Expect = 3e-23 Identities = 147/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||||| || || || | || || |||||||| |||||||| Sbjct 26900844 CTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCCAGCTGCTTTCCGGCGAA 26900903 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | ||| | || |||||||||| ||||| ||| | ||| Sbjct 26900904 GATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTCA-CGT 26900962 Query 46522 CGCCAC-CGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || |||||| ||||||||| || | ||||| || || ||||||||||| || | Sbjct 26900963 TGTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGCGTCTTCA 26901022 Query 46581 CAAAGATTTGCATTTTG 46597 | ||||| ||||| ||| Sbjct 26901023 CGAAGATCTGCATCTTG 26901039 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 32122423 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 32122364 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | ||| | | ||||||||| |||||| ||||| | Sbjct 32122363 GATGAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 32122304 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || ||||| || | ||||| || || ||||| || || || || Sbjct 32122303 ATCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTAAGGGTCTTCAC 32122244 Query 46582 AAAGATTTGCATTTT 46596 ||||| ||||| || Sbjct 32122243 GAAGATCTGCATCTT 32122229 Score = 113 bits (124), Expect = 5e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | | || ||||||||| | || |||||| || || || ||||||| Sbjct 1222288 CCTCCCCTGAGTCTCAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 1222347 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| | || ||||||||||||||||| || || | | ||||||||| | || Sbjct 1222348 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGAGGG 1222407 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | || |||||||||| |||||| ||| | ||| | | | |||||| |||| || Sbjct 1222408 ATGCCCTCCTTGTCCTGGATCTTGGCCTT-AACGTTGTCGATCGTGTCCGAGCTC---TC 1222463 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || || || |||||||| ||||| Sbjct 1222464 GACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 1222514 Score = 105 bits (116), Expect = 8e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| || |||||||| |||| || ||||| |||| || Sbjct 1222077 CACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTGCGACCGTCCTC 1222136 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || || | | ||||||||| | || | | |||||||||| Sbjct 1222137 GAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTG 1222196 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGG 46559 |||||| | | | | ||| | | | |||||| |||| || || |||| ||||||| Sbjct 1222197 GATCTT-TGCCTTAACGTTGTCGATCGTGTCAGAGCTC---TCAACCTCCAGGGTGATGG 1222252 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || ||||| ||||| Sbjct 1222253 TCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 1222286 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || || ||||||| | ||||| |||| ||||||||||| || ||||| Sbjct 1223266 CTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAA 1223325 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||||| || | | ||||||||| |||||| ||| | | Sbjct 1223326 GATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATT 1223385 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||||| || || | |||||||| ||||| || || ||||| || Sbjct 1223386 GTCGATGGTGTCGGAGGATTCAACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 1223445 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 1223446 GAAGATCTGCAT 1223457 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||||| || ||||| |||| |||||||||||||| || || Sbjct 4857960 CTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCTGCAAA 4857901 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | |||||||| | || | || |||||||||| |||||| ||| | | Sbjct 4857900 GATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATT 4857841 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| ||| ||| || |||| || ||||| || || || || || || Sbjct 4857840 GTCGATGGTGTCAGAGCT---TTCGACCTCCAAGGTTATGGTCTTCCCGGTGAGGGTCTT 4857784 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 4857783 CACAAAGATCTGCAT 4857769 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || || ||||||| | ||||| | || |||||||||||||||||||| Sbjct 1222551 CTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 1222610 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 |||| | ||| ||||| | || | || |||||||||| |||||| Sbjct 1222611 GATCAGCCTCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 1222658 >seq4576 Length=2771 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| | || || || | || |||||||||||||| ||||| Sbjct 2682 CTCTTTCTGGATGTTGTAGTCCGCAAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAA 2623 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | |||||||||| || | || ||| |||||| |||||| |||| ||| Sbjct 2622 AATGAGCCTTTGCTGGTCGGGAGGGATGCCCTCTTTGTCCTGGATCTTAGCTTTGA-CGT 2564 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || | ||||||||||| || || ||||| |||| Sbjct 2563 TGTCGATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTTTTTCCAGTGAGCGTCTTAA 2504 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 2503 CAAAGATCTGCAT 2491 >seq6 Length=34899179 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | || ||||| | || || || |||||||| || || Sbjct 13144354 CTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAA 13144295 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||| | |||||||| | || | | |||||| ||| |||||| |||| | Sbjct 13144294 TATCAACCTTTGCTGGTCCGGGGGTATTCCCTCCTTATCCTGGATCTTGGCTTTGACATT 13144235 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | ||||| || || || || || ||||| || Sbjct 13144234 GTCAATGGTGTCAGAGGATTCAACCTCAAGGGTGATCGTCTTTCCAGTGAGAGTTTTGAC 13144175 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 13144174 AAAGATTTGCAT 13144163 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| || ||||| | || |||||| | || ||||||||||| || || || Sbjct 13154734 TCCTTCTGGATGTTATAGTCTGCCAGTGTGCGCCCATCCTCGAGCTGCTTACCCGCAAAG 13154675 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | | ||| ||||| | || | | |||||||||| ||||| ||| | | Sbjct 13154674 ATTAGCCTCTGTTGGTCTGGTGGGATTCCCTCCTTGTCCTGTATCTTTGCCTTCACATTG 13154615 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | ||||| |||| || || |||| |||||||| || ||||| || ||||| Sbjct 13154614 TCGATAGTGTCCGAGCTC---TCAACCTCCAGAGTGATGGTCTTCCCCGTGAGGGTTTTC 13154558 Query 46580 ACAAAGATTTGCAT 46593 ||||| |||||||| Sbjct 13154557 ACAAAAATTTGCAT 13154544 >seq9 Length=34148863 Score = 102 bits (112), Expect = 9e-17 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||| || | | ||||| Sbjct 11332000 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGATCTCC----CCGCGAA 11332055 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||| ||||||| | | | | | ||||| ||| |||||| ||| | ||| Sbjct 11332056 GATGATACGCGGCTGGTCCGGCTGGATGTCCTCCTCCTCCTGGATCTTAGCCTTCA-CGT 11332114 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| ||||| || | ||||| || |||||||| || || || | Sbjct 11332115 TGTCGATCGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCA 11332174 Query 46581 CAAAGATTTGCATTTTGC 46598 ||||||||||||| |||| Sbjct 11332175 CAAAGATTTGCATCTTGC 11332192 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||| || | || ||||| |||| || |||||||| || ||||| Sbjct 33541399 TCCTTCTGAATGTTGTAATCTGCCAGGGTGCGGCCGTCCTCTAGCTGCTTCCCAGCGAAG 33541340 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | | |||||| || | || | | |||||||||| ||||||| ||||| ||| Sbjct 33541339 ATGAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTT 33541281 Query 46523 GCC-ACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| ||||| |||| || ||||| || || || || || || Sbjct 33541280 GTCGATCGTGTCCGAGCTC---TCCACCTCCAAGGTAATGGTCTTCCCGGTGAGGGTCTT 33541224 Query 46579 AACAAAGATTTGCAT 46593 ||||||||| ||||| Sbjct 33541223 AACAAAGATCTGCAT 33541209 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||| || | || |||||| |||| || |||||||| || || || Sbjct 33549005 TCCTTCTGAATGTTGTAATCTGCCAGGGTGCGCCCGTCCTCCAGCTGCTTCCCAGCAAAG 33549064 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | |||||| || | || | | |||||||||| |||||| ||||| | Sbjct 33549065 ATCAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTA 33549124 Query 46523 GCCACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | |||||| ||| ||||| |||| || ||||| || || || ||||| ||| Sbjct 33549125 TCAATCGTGTCCGAACTC---TCCACCTCCAAGGTAATGGTCTTCCCTGTGAGCGTCTTA 33549181 Query 46580 ACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 33549182 ACAAAGATCTGCAT 33549195 >seq1007 Length=1704909 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 32336 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 32395 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| || | | ||||||||| |||||| ||||| ||| Sbjct 32396 GATGAGCCGCTGCTGGTCCTGAGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 32454 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | | ||| || ||||| || | || || || || || || || || || | Sbjct 32455 TGTCGATGGCGTCCGATGACTCCACCTCGAGGGTAATCGTCTTCCCGGTGAGGGTCTTCA 32514 Query 46581 CAAAGATTTGCATTTT 46596 | ||||| ||||| || Sbjct 32515 CGAAGATCTGCATCTT 32530 >seq2 Length=22054697 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/190 (72%), Gaps = 7/190 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| |||||||| |||| |||||||||||||||| ||| Sbjct 17986790 CTCCTTCTGGATCCTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGAGAA 17986849 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||||| || | || ||| || ||||| |||||| | Sbjct 17986850 GATGAGTCGCTGTTGGTCGGTAGGGATGCCTTCCACGTTTTGGATCTCGGCCTTGAGGTT 17986909 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT-TT 46577 | | ||||| ||| ||||| ||| ||||||||| | ||||| || || | || Sbjct 17986910 ATCGATGGTGTCAGAGCT---TTCCATATCAACCGTGATGATCTTGCCGGTGAGAATCTT 17986966 Query 46578 TAACAAAGAT 46587 | ||||||| Sbjct 17986967 CAGCAAAGAT 17986976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565187111680680